Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 RN7SL81P-201ENST00000493781 261 ntBASIC16.41■□□□□ 0.22
CEP290O15078 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.41■□□□□ 0.22
CEP290O15078 AC018846.1-201ENST00000568231 183 ntBASIC16.41■□□□□ 0.22
CEP290O15078 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CEP290O15078 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CEP290O15078 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CEP290O15078 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.41■□□□□ 0.22
CEP290O15078 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.41■□□□□ 0.22
CEP290O15078 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CEP290O15078 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.41■□□□□ 0.22
CEP290O15078 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
CEP290O15078 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CEP290O15078 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.41■□□□□ 0.22
CEP290O15078 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CEP290O15078 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CEP290O15078 AC083801.1-201ENST00000491689 358 ntBASIC16.41■□□□□ 0.22
CEP290O15078 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CEP290O15078 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.41■□□□□ 0.22
CEP290O15078 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.41■□□□□ 0.22
CEP290O15078 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CEP290O15078 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CEP290O15078 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.41■□□□□ 0.22
CEP290O15078 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.41■□□□□ 0.22
CEP290O15078 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CEP290O15078 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CEP290O15078 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.4■□□□□ 0.22
CEP290O15078 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CEP290O15078 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.4■□□□□ 0.22
CEP290O15078 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CEP290O15078 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CEP290O15078 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CEP290O15078 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.4■□□□□ 0.22
CEP290O15078 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CEP290O15078 AL592076.1-201ENST00000424448 303 ntBASIC16.4■□□□□ 0.22
CEP290O15078 AC010900.1-201ENST00000449849 1296 ntBASIC16.4■□□□□ 0.22
CEP290O15078 AREG-202ENST00000502307 956 ntTSL 5 BASIC16.4■□□□□ 0.22
CEP290O15078 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.4■□□□□ 0.22
CEP290O15078 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC16.4■□□□□ 0.22
CEP290O15078 AP005264.6-204ENST00000588436 719 ntBASIC16.4■□□□□ 0.22
CEP290O15078 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC16.4■□□□□ 0.22
CEP290O15078 AP001184.1-201ENST00000637936 376 ntBASIC16.4■□□□□ 0.22
CEP290O15078 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC16.4■□□□□ 0.22
CEP290O15078 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CEP290O15078 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CEP290O15078 AC011840.2-201ENST00000563063 1520 ntBASIC16.4■□□□□ 0.22
CEP290O15078 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.4■□□□□ 0.22
CEP290O15078 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.4■□□□□ 0.22
CEP290O15078 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CEP290O15078 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CEP290O15078 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CEP290O15078 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CEP290O15078 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CEP290O15078 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC16.4■□□□□ 0.22
CEP290O15078 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CEP290O15078 AL929302.1-201ENST00000426556 871 ntBASIC16.4■□□□□ 0.22
CEP290O15078 PGAM1P12-201ENST00000505622 748 ntBASIC16.4■□□□□ 0.22
CEP290O15078 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC16.4■□□□□ 0.22
CEP290O15078 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC16.4■□□□□ 0.22
CEP290O15078 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CEP290O15078 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.4■□□□□ 0.22
CEP290O15078 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC16.4■□□□□ 0.22
CEP290O15078 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.4■□□□□ 0.22
CEP290O15078 AC087392.5-201ENST00000612517 489 ntBASIC16.4■□□□□ 0.22
CEP290O15078 AC011462.4-201ENST00000616866 449 ntBASIC16.4■□□□□ 0.22
CEP290O15078 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CEP290O15078 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CEP290O15078 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CEP290O15078 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.4■□□□□ 0.22
CEP290O15078 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.4■□□□□ 0.22
CEP290O15078 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CEP290O15078 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
CEP290O15078 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.39■□□□□ 0.22
CEP290O15078 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.39■□□□□ 0.21
CEP290O15078 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.39■□□□□ 0.21
CEP290O15078 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CEP290O15078 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CEP290O15078 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC16.39■□□□□ 0.21
CEP290O15078 IGKV1OR-2-201ENST00000457995 350 ntBASIC16.39■□□□□ 0.21
CEP290O15078 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC16.39■□□□□ 0.21
CEP290O15078 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CEP290O15078 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC16.39■□□□□ 0.21
CEP290O15078 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.39■□□□□ 0.21
CEP290O15078 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CEP290O15078 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.39■□□□□ 0.21
CEP290O15078 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CEP290O15078 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CEP290O15078 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CEP290O15078 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CEP290O15078 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CEP290O15078 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CEP290O15078 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.39■□□□□ 0.21
CEP290O15078 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CEP290O15078 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CEP290O15078 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CEP290O15078 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CEP290O15078 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.39■□□□□ 0.21
CEP290O15078 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CEP290O15078 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.39■□□□□ 0.21
CEP290O15078 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.39■□□□□ 0.21
CEP290O15078 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms