Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC20.87■□□□□ 0.93
CHD2O14647 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD2O14647 LINC01815-202ENST00000641468 1409 ntBASIC20.87■□□□□ 0.93
CHD2O14647 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD2O14647 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD2O14647 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CHD2O14647 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD2O14647 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC20.87■□□□□ 0.93
CHD2O14647 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC20.87■□□□□ 0.93
CHD2O14647 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC20.87■□□□□ 0.93
CHD2O14647 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC20.87■□□□□ 0.93
CHD2O14647 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CHD2O14647 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC20.87■□□□□ 0.93
CHD2O14647 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD2O14647 AC004837.1-201ENST00000446267 564 ntBASIC20.87■□□□□ 0.93
CHD2O14647 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC20.87■□□□□ 0.93
CHD2O14647 DNM1P51-201ENST00000558149 522 ntBASIC20.87■□□□□ 0.93
CHD2O14647 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC20.87■□□□□ 0.93
CHD2O14647 LINC01783-202ENST00000614408 828 ntBASIC20.87■□□□□ 0.93
CHD2O14647 BX284668.2-205ENST00000619677 828 ntBASIC20.87■□□□□ 0.93
CHD2O14647 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD2O14647 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD2O14647 AC006449.5-201ENST00000610658 2098 ntBASIC20.87■□□□□ 0.93
CHD2O14647 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD2O14647 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC20.87■□□□□ 0.93
CHD2O14647 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHD2O14647 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD2O14647 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHD2O14647 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CHD2O14647 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
CHD2O14647 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHD2O14647 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CHD2O14647 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD2O14647 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD2O14647 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC20.86■□□□□ 0.93
CHD2O14647 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHD2O14647 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CHD2O14647 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CHD2O14647 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC20.86■□□□□ 0.93
CHD2O14647 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD2O14647 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHD2O14647 BANF1P3-201ENST00000412556 261 ntBASIC20.86■□□□□ 0.93
CHD2O14647 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC20.86■□□□□ 0.93
CHD2O14647 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHD2O14647 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC20.86■□□□□ 0.93
CHD2O14647 AC244250.3-201ENST00000620749 366 ntBASIC20.86■□□□□ 0.93
CHD2O14647 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD2O14647 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD2O14647 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHD2O14647 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD2O14647 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CHD2O14647 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHD2O14647 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC20.86■□□□□ 0.93
CHD2O14647 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CHD2O14647 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD2O14647 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHD2O14647 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD2O14647 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.85■□□□□ 0.93
CHD2O14647 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHD2O14647 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC20.85■□□□□ 0.93
CHD2O14647 AC093752.3-201ENST00000567343 901 ntBASIC20.85■□□□□ 0.93
CHD2O14647 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC20.85■□□□□ 0.93
CHD2O14647 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC20.85■□□□□ 0.93
CHD2O14647 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHD2O14647 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHD2O14647 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.85■□□□□ 0.93
CHD2O14647 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.85■□□□□ 0.93
CHD2O14647 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHD2O14647 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHD2O14647 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHD2O14647 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHD2O14647 TSPY25P-201ENST00000429463 745 ntBASIC20.85■□□□□ 0.93
CHD2O14647 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC20.85■□□□□ 0.93
CHD2O14647 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC20.85■□□□□ 0.93
CHD2O14647 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC20.85■□□□□ 0.93
CHD2O14647 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CHD2O14647 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHD2O14647 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHD2O14647 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CHD2O14647 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHD2O14647 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CHD2O14647 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.85■□□□□ 0.93
CHD2O14647 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHD2O14647 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHD2O14647 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC20.84■□□□□ 0.93
CHD2O14647 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHD2O14647 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC20.84■□□□□ 0.93
CHD2O14647 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC20.84■□□□□ 0.93
CHD2O14647 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHD2O14647 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHD2O14647 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHD2O14647 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC20.84■□□□□ 0.93
CHD2O14647 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC20.84■□□□□ 0.93
CHD2O14647 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC20.84■□□□□ 0.93
CHD2O14647 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CHD2O14647 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHD2O14647 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHD2O14647 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHD2O14647 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHD2O14647 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms