Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 HLA-A-201ENST00000376802 1334 ntBASIC16.13■□□□□ 0.17
CCDC188H7C350 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CCDC188H7C350 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC188H7C350 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.13■□□□□ 0.17
CCDC188H7C350 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC188H7C350 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC188H7C350 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC188H7C350 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.13■□□□□ 0.17
CCDC188H7C350 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC188H7C350 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC188H7C350 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC188H7C350 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC188H7C350 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC188H7C350 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC188H7C350 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CCDC188H7C350 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC188H7C350 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CCDC188H7C350 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC188H7C350 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC188H7C350 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC188H7C350 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC188H7C350 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC188H7C350 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC188H7C350 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CCDC188H7C350 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC188H7C350 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC188H7C350 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC188H7C350 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.12■□□□□ 0.17
CCDC188H7C350 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.12■□□□□ 0.17
CCDC188H7C350 RARRES2P9-201ENST00000565168 469 ntBASIC16.12■□□□□ 0.17
CCDC188H7C350 AC106730.1-201ENST00000566722 1090 ntBASIC16.12■□□□□ 0.17
CCDC188H7C350 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.12■□□□□ 0.17
CCDC188H7C350 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC188H7C350 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.12■□□□□ 0.17
CCDC188H7C350 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.12■□□□□ 0.17
CCDC188H7C350 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC188H7C350 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC188H7C350 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.12■□□□□ 0.17
CCDC188H7C350 AC005840.4-201ENST00000541242 2494 ntBASIC16.12■□□□□ 0.17
CCDC188H7C350 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC188H7C350 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.12■□□□□ 0.17
CCDC188H7C350 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CCDC188H7C350 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.12■□□□□ 0.17
CCDC188H7C350 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.12■□□□□ 0.17
CCDC188H7C350 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC188H7C350 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC188H7C350 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC188H7C350 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC188H7C350 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC188H7C350 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC188H7C350 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC188H7C350 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC16.11■□□□□ 0.17
CCDC188H7C350 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC188H7C350 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
CCDC188H7C350 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC188H7C350 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC188H7C350 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC188H7C350 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
CCDC188H7C350 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC188H7C350 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
CCDC188H7C350 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC188H7C350 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC188H7C350 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC188H7C350 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.11■□□□□ 0.17
CCDC188H7C350 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.11■□□□□ 0.17
CCDC188H7C350 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC188H7C350 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC188H7C350 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC188H7C350 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC188H7C350 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC188H7C350 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC188H7C350 AC104457.1-201ENST00000401024 814 ntBASIC16.11■□□□□ 0.17
CCDC188H7C350 SPDYE17-201ENST00000412399 783 ntBASIC16.11■□□□□ 0.17
CCDC188H7C350 HIST3H2BA-201ENST00000436555 524 ntBASIC16.11■□□□□ 0.17
CCDC188H7C350 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.11■□□□□ 0.17
CCDC188H7C350 AC079140.1-201ENST00000508039 487 ntBASIC16.11■□□□□ 0.17
CCDC188H7C350 RNA5SP416-201ENST00000516838 111 ntBASIC16.11■□□□□ 0.17
CCDC188H7C350 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
CCDC188H7C350 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.11■□□□□ 0.17
CCDC188H7C350 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.11■□□□□ 0.17
CCDC188H7C350 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC188H7C350 AC015910.1-201ENST00000579400 975 ntBASIC16.11■□□□□ 0.17
CCDC188H7C350 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.11■□□□□ 0.17
CCDC188H7C350 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
CCDC188H7C350 AC092902.6-201ENST00000641783 218 ntBASIC16.11■□□□□ 0.17
CCDC188H7C350 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC188H7C350 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC188H7C350 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC188H7C350 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CCDC188H7C350 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CCDC188H7C350 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC188H7C350 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.11■□□□□ 0.17
CCDC188H7C350 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CCDC188H7C350 REXO1L4P-201ENST00000605109 1937 ntBASIC16.11■□□□□ 0.17
CCDC188H7C350 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC188H7C350 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC188H7C350 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC188H7C350 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC188H7C350 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
CCDC188H7C350 AC117489.1-201ENST00000625169 3217 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms