Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM49D1C9J1S8 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 YBX2P1-201ENST00000394192 760 ntBASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 AC120114.3-201ENST00000611923 658 ntBASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 BX640515.1-201ENST00000617215 977 ntBASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 AC015656.1-201ENST00000624209 3578 ntBASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM49D1C9J1S8 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 GHSR-202ENST00000427970 912 ntBASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 AL353705.2-201ENST00000428243 662 ntBASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 AC105021.1-202ENST00000570572 669 ntBASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 AC011467.4-201ENST00000594891 528 ntBASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM49D1C9J1S8 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms