Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC243562.2-201ENST00000561247 970 ntBASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AL596325.1-201ENST00000563991 1082 ntBASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC140912.1-201ENST00000577171 1054 ntBASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 LINC02228-204ENST00000642115 2962 ntBASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 OR2I1P-210ENST00000642037 4691 ntBASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 C1R-202ENST00000536053 2347 ntTSL 2 BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC112693.3-201ENST00000624819 1983 ntBASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 TP53TG3HP-202ENST00000569755 579 ntBASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AL109936.8-201ENST00000641772 604 ntBASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 C18orf15-201ENST00000623680 2534 ntBASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.51□□□□□ -0.41
TCRBV4S1A1TA0A5B7 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 TCAF2P1-201ENST00000291129 2421 ntBASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms