Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 ACKR1-201ENST00000368121 1240 ntBASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 AL139094.1-201ENST00000405549 1188 ntBASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 AL033527.5-201ENST00000641382 801 ntBASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 TNRC18P2-201ENST00000417666 2714 ntBASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 LILRP1-201ENST00000444199 1370 ntBASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 AC098614.1-201ENST00000368528 745 ntBASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 AP001582.1-201ENST00000525856 295 ntBASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 AP001063.1-201ENST00000568332 529 ntBASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 AC027307.3-201ENST00000594262 1100 ntBASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 CU634019.7-201ENST00000624153 1185 ntBASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 FP236241.2-201ENST00000624906 1185 ntBASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms