Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LOC102724428A0A0B4J2F2 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
LOC102724428A0A0B4J2F2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LOC102724428A0A0B4J2F2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LOC102724428A0A0B4J2F2 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
LOC102724428A0A0B4J2F2 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.37■□□□□ 0.69
LOC102724428A0A0B4J2F2 PCDHA14-201ENST00000506751 2298 ntBASIC19.37■□□□□ 0.69
LOC102724428A0A0B4J2F2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
LOC102724428A0A0B4J2F2 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.37■□□□□ 0.69
LOC102724428A0A0B4J2F2 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.37■□□□□ 0.69
LOC102724428A0A0B4J2F2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.37■□□□□ 0.69
LOC102724428A0A0B4J2F2 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
LOC102724428A0A0B4J2F2 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
LOC102724428A0A0B4J2F2 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LOC102724428A0A0B4J2F2 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC19.37■□□□□ 0.69
LOC102724428A0A0B4J2F2 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LOC102724428A0A0B4J2F2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
LOC102724428A0A0B4J2F2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
LOC102724428A0A0B4J2F2 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LOC102724428A0A0B4J2F2 AL360270.3-201ENST00000609118 1348 ntBASIC19.37■□□□□ 0.69
LOC102724428A0A0B4J2F2 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LOC102724428A0A0B4J2F2 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
LOC102724428A0A0B4J2F2 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LOC102724428A0A0B4J2F2 AK6-201ENST00000380818 1183 ntTSL 2 BASIC19.37■□□□□ 0.69
LOC102724428A0A0B4J2F2 RPL5P21-201ENST00000404620 815 ntBASIC19.37■□□□□ 0.69
LOC102724428A0A0B4J2F2 FGFR3P1-201ENST00000449999 601 ntBASIC19.37■□□□□ 0.69
LOC102724428A0A0B4J2F2 CDC23-208ENST00000505120 455 ntTSL 3 BASIC19.37■□□□□ 0.69
LOC102724428A0A0B4J2F2 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC19.37■□□□□ 0.69
LOC102724428A0A0B4J2F2 MIR4750-201ENST00000584564 56 ntBASIC19.37■□□□□ 0.69
LOC102724428A0A0B4J2F2 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC19.37■□□□□ 0.69
LOC102724428A0A0B4J2F2 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LOC102724428A0A0B4J2F2 AC092127.1-201ENST00000567093 3455 ntBASIC19.37■□□□□ 0.69
LOC102724428A0A0B4J2F2 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LOC102724428A0A0B4J2F2 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LOC102724428A0A0B4J2F2 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LOC102724428A0A0B4J2F2 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LOC102724428A0A0B4J2F2 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LOC102724428A0A0B4J2F2 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 AC026316.1-201ENST00000398900 414 ntBASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 VDAC1P1-201ENST00000439229 848 ntBASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 HLA-J-204ENST00000495278 958 ntBASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 RCC2P8-201ENST00000502779 1035 ntBASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 IGLV3-15-201ENST00000518356 244 ntBASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 AC138696.2-201ENST00000607376 223 ntBASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 AC103691.2-201ENST00000618824 433 ntBASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 PCDH8P1-201ENST00000428983 2773 ntBASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LOC102724428A0A0B4J2F2 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 AC009779.1-201ENST00000551138 283 ntBASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 MIR4754-201ENST00000582477 89 ntBASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 WDR7-208ENST00000589935 544 ntTSL 4 BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms