Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AL671277.1-201ENST00000429656 993 ntBASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 CBFB-203ENST00000561924 584 ntTSL 5 BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 AL135744.1-201ENST00000565098 629 ntBASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 AC008267.7-201ENST00000624570 1194 ntBASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 AC092865.6-201ENST00000642101 219 ntBASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 FAM220BP-201ENST00000377689 816 ntBASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 AZGP1P1-201ENST00000411909 902 ntBASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
TRAV5A0A0B4J249 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
TRAV5A0A0B4J249 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.08□□□□□ -0.47
TRAV5A0A0B4J249 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
TRAV5A0A0B4J249 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.47
TRAV5A0A0B4J249 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
TRAV5A0A0B4J249 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms