Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 MIR3687-2-201ENST00000577708 61 ntBASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 AP001160.2-201ENST00000596071 487 ntBASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 MIR3687-1-201ENST00000614492 61 ntBASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.27□□□□□ -0.12
PCDHGB1Q9Y5G3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.27□□□□□ -0.12
PCDHGB1Q9Y5G3 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.27□□□□□ -0.12
PCDHGB1Q9Y5G3 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
PCDHGB1Q9Y5G3 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGB1Q9Y5G3 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGB1Q9Y5G3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGB1Q9Y5G3 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGB1Q9Y5G3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
PCDHGB1Q9Y5G3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGB1Q9Y5G3 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGB1Q9Y5G3 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
PCDHGB1Q9Y5G3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGB1Q9Y5G3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGB1Q9Y5G3 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGB1Q9Y5G3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGB1Q9Y5G3 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGB1Q9Y5G3 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGB1Q9Y5G3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGB1Q9Y5G3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.27□□□□□ -0.12
PCDHGB1Q9Y5G3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGB1Q9Y5G3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGB1Q9Y5G3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.27□□□□□ -0.13
PCDHGB1Q9Y5G3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
PCDHGB1Q9Y5G3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.27□□□□□ -0.13
PCDHGB1Q9Y5G3 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.27□□□□□ -0.13
PCDHGB1Q9Y5G3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.27□□□□□ -0.13
PCDHGB1Q9Y5G3 MIR4751-201ENST00000578027 74 ntBASIC14.27□□□□□ -0.13
PCDHGB1Q9Y5G3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.27□□□□□ -0.13
PCDHGB1Q9Y5G3 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.27□□□□□ -0.13
PCDHGB1Q9Y5G3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.27□□□□□ -0.13
PCDHGB1Q9Y5G3 FAM197Y3-203ENST00000618346 717 ntBASIC14.27□□□□□ -0.13
PCDHGB1Q9Y5G3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.27□□□□□ -0.13
PCDHGB1Q9Y5G3 AC079781.4-201ENST00000641908 219 ntBASIC14.27□□□□□ -0.13
PCDHGB1Q9Y5G3 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGB1Q9Y5G3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGB1Q9Y5G3 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGB1Q9Y5G3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGB1Q9Y5G3 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.27□□□□□ -0.13
PCDHGB1Q9Y5G3 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGB1Q9Y5G3 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGB1Q9Y5G3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.27□□□□□ -0.13
PCDHGB1Q9Y5G3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGB1Q9Y5G3 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
PCDHGB1Q9Y5G3 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGB1Q9Y5G3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGB1Q9Y5G3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGB1Q9Y5G3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
PCDHGB1Q9Y5G3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGB1Q9Y5G3 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
PCDHGB1Q9Y5G3 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.26□□□□□ -0.13
PCDHGB1Q9Y5G3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGB1Q9Y5G3 AC018892.3-201ENST00000623986 2499 ntBASIC14.26□□□□□ -0.13
PCDHGB1Q9Y5G3 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGB1Q9Y5G3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms