Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 U91328.1-201ENST00000437528 223 ntBASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 AC092127.1-201ENST00000567093 3455 ntBASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 AC023310.3-201ENST00000557027 670 ntBASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 AC100756.1-201ENST00000562736 682 ntBASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 AC138749.3-201ENST00000567691 622 ntBASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 AC116165.1-201ENST00000611806 668 ntBASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 CU639417.3-201ENST00000624240 1404 ntBASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RPH3AQ9Y2J0 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 RPL13P2-201ENST00000440687 659 ntBASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 KRT17P7-201ENST00000451704 1104 ntBASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 SLED1-202ENST00000512051 380 ntBASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms