Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PHF8Q9UPP1 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC20.74■□□□□ 0.91
PHF8Q9UPP1 AC026316.1-201ENST00000398900 414 ntBASIC20.74■□□□□ 0.91
PHF8Q9UPP1 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC20.74■□□□□ 0.91
PHF8Q9UPP1 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
PHF8Q9UPP1 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PHF8Q9UPP1 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC20.74■□□□□ 0.91
PHF8Q9UPP1 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC20.74■□□□□ 0.91
PHF8Q9UPP1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.74■□□□□ 0.91
PHF8Q9UPP1 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC20.74■□□□□ 0.91
PHF8Q9UPP1 AC011491.1-203ENST00000637688 543 ntBASIC20.74■□□□□ 0.91
PHF8Q9UPP1 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
PHF8Q9UPP1 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PHF8Q9UPP1 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PHF8Q9UPP1 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC20.74■□□□□ 0.91
PHF8Q9UPP1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PHF8Q9UPP1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PHF8Q9UPP1 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
PHF8Q9UPP1 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PHF8Q9UPP1 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PHF8Q9UPP1 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PHF8Q9UPP1 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PHF8Q9UPP1 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PHF8Q9UPP1 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PHF8Q9UPP1 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PHF8Q9UPP1 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PHF8Q9UPP1 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PHF8Q9UPP1 AK6-201ENST00000380818 1183 ntTSL 2 BASIC20.73■□□□□ 0.91
PHF8Q9UPP1 VDAC1P1-201ENST00000439229 848 ntBASIC20.73■□□□□ 0.91
PHF8Q9UPP1 AC098935.1-201ENST00000446057 611 ntBASIC20.73■□□□□ 0.91
PHF8Q9UPP1 AC073150.1-201ENST00000450406 1084 ntBASIC20.73■□□□□ 0.91
PHF8Q9UPP1 HLA-J-204ENST00000495278 958 ntBASIC20.73■□□□□ 0.91
PHF8Q9UPP1 RCC2P8-201ENST00000502779 1035 ntBASIC20.73■□□□□ 0.91
PHF8Q9UPP1 CDC23-208ENST00000505120 455 ntTSL 3 BASIC20.73■□□□□ 0.91
PHF8Q9UPP1 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC20.73■□□□□ 0.91
PHF8Q9UPP1 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC20.73■□□□□ 0.91
PHF8Q9UPP1 MIR4754-201ENST00000582477 89 ntBASIC20.73■□□□□ 0.91
PHF8Q9UPP1 WDR7-208ENST00000589935 544 ntTSL 4 BASIC20.73■□□□□ 0.91
PHF8Q9UPP1 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PHF8Q9UPP1 AC103691.2-201ENST00000618824 433 ntBASIC20.73■□□□□ 0.91
PHF8Q9UPP1 AL157414.3-201ENST00000624276 1954 ntBASIC20.73■□□□□ 0.91
PHF8Q9UPP1 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PHF8Q9UPP1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PHF8Q9UPP1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PHF8Q9UPP1 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PHF8Q9UPP1 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PHF8Q9UPP1 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PHF8Q9UPP1 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC20.73■□□□□ 0.91
PHF8Q9UPP1 GCK-209ENST00000616242 2260 ntTSL 5 BASIC20.73■□□□□ 0.91
PHF8Q9UPP1 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 RPL5P21-201ENST00000404620 815 ntBASIC20.72■□□□□ 0.91
PHF8Q9UPP1 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 AC090857.1-201ENST00000527400 390 ntBASIC20.72■□□□□ 0.91
PHF8Q9UPP1 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 AC009779.1-201ENST00000551138 283 ntBASIC20.72■□□□□ 0.91
PHF8Q9UPP1 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 AC138696.2-201ENST00000607376 223 ntBASIC20.72■□□□□ 0.91
PHF8Q9UPP1 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 AD000864.1-201ENST00000624076 2295 ntBASIC20.72■□□□□ 0.91
PHF8Q9UPP1 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 TNRC18P3-201ENST00000441896 2691 ntBASIC20.72■□□□□ 0.91
PHF8Q9UPP1 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 AL360270.3-201ENST00000609118 1348 ntBASIC20.72■□□□□ 0.91
PHF8Q9UPP1 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 MST1L-201ENST00000442552 2185 ntBASIC20.72■□□□□ 0.91
PHF8Q9UPP1 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 ACE-204ENST00000428043 5120 ntTSL 2 BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHF8Q9UPP1 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PHF8Q9UPP1 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PHF8Q9UPP1 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC20.71■□□□□ 0.91
PHF8Q9UPP1 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PHF8Q9UPP1 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PHF8Q9UPP1 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PHF8Q9UPP1 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms