Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.03■□□□□ -0
CPNE7Q9UBL6 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE7Q9UBL6 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.03■□□□□ -0
CPNE7Q9UBL6 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.03■□□□□ -0
CPNE7Q9UBL6 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE7Q9UBL6 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.03■□□□□ -0
CPNE7Q9UBL6 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.03■□□□□ -0
CPNE7Q9UBL6 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.03■□□□□ -0
CPNE7Q9UBL6 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.03■□□□□ -0
CPNE7Q9UBL6 AC022137.2-201ENST00000503482 481 ntBASIC15.03■□□□□ -0
CPNE7Q9UBL6 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
CPNE7Q9UBL6 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.03■□□□□ -0
CPNE7Q9UBL6 AP005482.1-201ENST00000563722 1273 ntBASIC15.03■□□□□ -0
CPNE7Q9UBL6 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.03■□□□□ -0
CPNE7Q9UBL6 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.03■□□□□ -0
CPNE7Q9UBL6 MIR6775-201ENST00000617557 69 ntBASIC15.03■□□□□ -0
CPNE7Q9UBL6 BX539320.1-201ENST00000623759 877 ntBASIC15.03■□□□□ -0
CPNE7Q9UBL6 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE7Q9UBL6 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE7Q9UBL6 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE7Q9UBL6 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE7Q9UBL6 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.03■□□□□ -0
CPNE7Q9UBL6 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE7Q9UBL6 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE7Q9UBL6 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE7Q9UBL6 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE7Q9UBL6 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.03■□□□□ -0
CPNE7Q9UBL6 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE7Q9UBL6 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
CPNE7Q9UBL6 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CPNE7Q9UBL6 AC022188.1-201ENST00000620960 1664 ntBASIC15.03■□□□□ -0
CPNE7Q9UBL6 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.03■□□□□ -0
CPNE7Q9UBL6 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.03■□□□□ -0
CPNE7Q9UBL6 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.03■□□□□ -0
CPNE7Q9UBL6 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE7Q9UBL6 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.03■□□□□ -0
CPNE7Q9UBL6 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.03■□□□□ -0
CPNE7Q9UBL6 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.03■□□□□ -0
CPNE7Q9UBL6 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.02■□□□□ -0
CPNE7Q9UBL6 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.02■□□□□ -0
CPNE7Q9UBL6 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CPNE7Q9UBL6 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CPNE7Q9UBL6 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CPNE7Q9UBL6 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.02■□□□□ -0
CPNE7Q9UBL6 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.02■□□□□ -0
CPNE7Q9UBL6 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.02■□□□□ -0
CPNE7Q9UBL6 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CPNE7Q9UBL6 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.02■□□□□ -0
CPNE7Q9UBL6 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
CPNE7Q9UBL6 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CPNE7Q9UBL6 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CPNE7Q9UBL6 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CPNE7Q9UBL6 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CPNE7Q9UBL6 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.02■□□□□ -0
CPNE7Q9UBL6 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.02■□□□□ -0
CPNE7Q9UBL6 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.02■□□□□ -0
CPNE7Q9UBL6 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.02■□□□□ -0
CPNE7Q9UBL6 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.02■□□□□ -0
CPNE7Q9UBL6 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
CPNE7Q9UBL6 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.02■□□□□ -0
CPNE7Q9UBL6 AC104989.1-201ENST00000519711 778 ntBASIC15.02■□□□□ -0
CPNE7Q9UBL6 SNX29P1-201ENST00000548357 1007 ntBASIC15.02■□□□□ -0
CPNE7Q9UBL6 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.02■□□□□ -0
CPNE7Q9UBL6 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.02■□□□□ -0
CPNE7Q9UBL6 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.02■□□□□ -0
CPNE7Q9UBL6 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CPNE7Q9UBL6 AP005019.2-201ENST00000615104 511 ntBASIC15.02■□□□□ -0
CPNE7Q9UBL6 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CPNE7Q9UBL6 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CPNE7Q9UBL6 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
CPNE7Q9UBL6 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CPNE7Q9UBL6 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CPNE7Q9UBL6 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CPNE7Q9UBL6 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CPNE7Q9UBL6 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CPNE7Q9UBL6 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CPNE7Q9UBL6 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CPNE7Q9UBL6 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.02□□□□□ -0.01
CPNE7Q9UBL6 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CPNE7Q9UBL6 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CPNE7Q9UBL6 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CPNE7Q9UBL6 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CPNE7Q9UBL6 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.02□□□□□ -0.01
CPNE7Q9UBL6 PDIA3P1-201ENST00000471856 1510 ntBASIC15.02□□□□□ -0.01
CPNE7Q9UBL6 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CPNE7Q9UBL6 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CPNE7Q9UBL6 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CPNE7Q9UBL6 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CPNE7Q9UBL6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CPNE7Q9UBL6 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CPNE7Q9UBL6 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.01□□□□□ -0.01
CPNE7Q9UBL6 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.01□□□□□ -0.01
CPNE7Q9UBL6 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CPNE7Q9UBL6 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CPNE7Q9UBL6 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.01□□□□□ -0.01
CPNE7Q9UBL6 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.01□□□□□ -0.01
CPNE7Q9UBL6 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CPNE7Q9UBL6 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPNE7Q9UBL6 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.01□□□□□ -0.01
CPNE7Q9UBL6 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms