Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HPS4Q9NQG7 AC068418.2-201ENST00000577309 3703 ntBASIC16.06■□□□□ 0.16
HPS4Q9NQG7 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HPS4Q9NQG7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HPS4Q9NQG7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
HPS4Q9NQG7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HPS4Q9NQG7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HPS4Q9NQG7 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
HPS4Q9NQG7 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HPS4Q9NQG7 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.06■□□□□ 0.16
HPS4Q9NQG7 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
HPS4Q9NQG7 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HPS4Q9NQG7 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HPS4Q9NQG7 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
HPS4Q9NQG7 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HPS4Q9NQG7 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HPS4Q9NQG7 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.06■□□□□ 0.16
HPS4Q9NQG7 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.06■□□□□ 0.16
HPS4Q9NQG7 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.06■□□□□ 0.16
HPS4Q9NQG7 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.06■□□□□ 0.16
HPS4Q9NQG7 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
HPS4Q9NQG7 AC093813.1-201ENST00000605066 256 ntBASIC16.06■□□□□ 0.16
HPS4Q9NQG7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HPS4Q9NQG7 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HPS4Q9NQG7 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HPS4Q9NQG7 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HPS4Q9NQG7 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.06■□□□□ 0.16
HPS4Q9NQG7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HPS4Q9NQG7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.06■□□□□ 0.16
HPS4Q9NQG7 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HPS4Q9NQG7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HPS4Q9NQG7 AC011477.6-201ENST00000604980 1927 ntBASIC16.06■□□□□ 0.16
HPS4Q9NQG7 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 NORAD-201ENST00000565493 5339 ntBASIC16.05■□□□□ 0.16
HPS4Q9NQG7 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 ACKR1-201ENST00000368121 1240 ntBASIC16.05■□□□□ 0.16
HPS4Q9NQG7 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 AL133267.1-201ENST00000398220 340 ntBASIC16.05■□□□□ 0.16
HPS4Q9NQG7 BRWD1P1-201ENST00000401091 371 ntBASIC16.05■□□□□ 0.16
HPS4Q9NQG7 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 AL606495.2-201ENST00000605867 535 ntBASIC16.05■□□□□ 0.16
HPS4Q9NQG7 MIR6787-201ENST00000616675 61 ntBASIC16.05■□□□□ 0.16
HPS4Q9NQG7 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.05■□□□□ 0.16
HPS4Q9NQG7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.04■□□□□ 0.16
HPS4Q9NQG7 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms