Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM2Q9C040 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.33□□□□□ -0.12
TRIM2Q9C040 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.32□□□□□ -0.12
TRIM2Q9C040 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
TRIM2Q9C040 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRIM2Q9C040 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM2Q9C040 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.32□□□□□ -0.12
TRIM2Q9C040 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM2Q9C040 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.32□□□□□ -0.12
TRIM2Q9C040 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM2Q9C040 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM2Q9C040 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRIM2Q9C040 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
TRIM2Q9C040 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM2Q9C040 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.32□□□□□ -0.12
TRIM2Q9C040 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
TRIM2Q9C040 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM2Q9C040 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM2Q9C040 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM2Q9C040 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
TRIM2Q9C040 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TRIM2Q9C040 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM2Q9C040 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM2Q9C040 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM2Q9C040 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM2Q9C040 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM2Q9C040 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.32□□□□□ -0.12
TRIM2Q9C040 HLA-V-204ENST00000476601 1289 ntBASIC14.32□□□□□ -0.12
TRIM2Q9C040 SLED1-202ENST00000512051 380 ntBASIC14.32□□□□□ -0.12
TRIM2Q9C040 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.32□□□□□ -0.12
TRIM2Q9C040 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.32□□□□□ -0.12
TRIM2Q9C040 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.32□□□□□ -0.12
TRIM2Q9C040 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM2Q9C040 AL390955.2-201ENST00000603032 514 ntBASIC14.32□□□□□ -0.12
TRIM2Q9C040 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM2Q9C040 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.32□□□□□ -0.12
TRIM2Q9C040 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TRIM2Q9C040 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM2Q9C040 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM2Q9C040 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.32□□□□□ -0.12
TRIM2Q9C040 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM2Q9C040 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRIM2Q9C040 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.32□□□□□ -0.12
TRIM2Q9C040 TNRC18P2-201ENST00000417666 2714 ntBASIC14.32□□□□□ -0.12
TRIM2Q9C040 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TRIM2Q9C040 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
TRIM2Q9C040 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TRIM2Q9C040 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
TRIM2Q9C040 TCAF2P1-201ENST00000291129 2421 ntBASIC14.32□□□□□ -0.12
TRIM2Q9C040 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRIM2Q9C040 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM2Q9C040 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM2Q9C040 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM2Q9C040 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM2Q9C040 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM2Q9C040 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.31□□□□□ -0.12
TRIM2Q9C040 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM2Q9C040 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.31□□□□□ -0.12
TRIM2Q9C040 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM2Q9C040 AC023024.2-201ENST00000623561 1993 ntBASIC14.31□□□□□ -0.12
TRIM2Q9C040 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM2Q9C040 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TRIM2Q9C040 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRIM2Q9C040 Z97205.2-201ENST00000564697 1639 ntBASIC14.31□□□□□ -0.12
TRIM2Q9C040 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.31□□□□□ -0.12
TRIM2Q9C040 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
TRIM2Q9C040 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.31□□□□□ -0.12
TRIM2Q9C040 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM2Q9C040 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM2Q9C040 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRIM2Q9C040 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM2Q9C040 AC125807.1-201ENST00000483097 614 ntBASIC14.31□□□□□ -0.12
TRIM2Q9C040 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.31□□□□□ -0.12
TRIM2Q9C040 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.31□□□□□ -0.12
TRIM2Q9C040 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.31□□□□□ -0.12
TRIM2Q9C040 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRIM2Q9C040 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.31□□□□□ -0.12
TRIM2Q9C040 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM2Q9C040 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM2Q9C040 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM2Q9C040 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRIM2Q9C040 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM2Q9C040 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM2Q9C040 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.31□□□□□ -0.12
TRIM2Q9C040 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TRIM2Q9C040 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM2Q9C040 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TRIM2Q9C040 FO538757.1-201ENST00000623083 1397 ntBASIC14.31□□□□□ -0.12
TRIM2Q9C040 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM2Q9C040 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM2Q9C040 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
TRIM2Q9C040 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.31□□□□□ -0.12
TRIM2Q9C040 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.31□□□□□ -0.12
TRIM2Q9C040 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.3□□□□□ -0.12
TRIM2Q9C040 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TRIM2Q9C040 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.3□□□□□ -0.12
TRIM2Q9C040 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TRIM2Q9C040 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.3□□□□□ -0.12
TRIM2Q9C040 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM2Q9C040 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms