Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 SLC7A15P-201ENST00000424028 1363 ntBASIC10.88□□□□□ -0.67
UPK3BQ9BT76 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 REXO1L1P-202ENST00000608646 1974 ntBASIC10.87□□□□□ -0.67
UPK3BQ9BT76 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 AC098614.1-201ENST00000368528 745 ntBASIC10.87□□□□□ -0.67
UPK3BQ9BT76 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 CD81-207ENST00000481687 890 ntTSL 2 BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 SPDYE18-201ENST00000510091 1050 ntBASIC10.87□□□□□ -0.67
UPK3BQ9BT76 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 CR383656.12-201ENST00000549567 513 ntBASIC10.87□□□□□ -0.67
UPK3BQ9BT76 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 AC012645.4-201ENST00000610691 1061 ntBASIC10.87□□□□□ -0.67
UPK3BQ9BT76 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC10.87□□□□□ -0.67
UPK3BQ9BT76 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC10.87□□□□□ -0.67
UPK3BQ9BT76 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 AC087386.2-201ENST00000623212 4637 ntBASIC10.86□□□□□ -0.67
UPK3BQ9BT76 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms