Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 AC027307.3-201ENST00000594262 1100 ntBASIC16.04■□□□□ 0.16
HAPLN3Q96S86 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 AC008494.3-201ENST00000606615 944 ntBASIC16.04■□□□□ 0.16
HAPLN3Q96S86 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 AC126365.1-201ENST00000578585 1514 ntBASIC16.04■□□□□ 0.16
HAPLN3Q96S86 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HAPLN3Q96S86 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HAPLN3Q96S86 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
HAPLN3Q96S86 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HAPLN3Q96S86 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HAPLN3Q96S86 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HAPLN3Q96S86 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HAPLN3Q96S86 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HAPLN3Q96S86 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HAPLN3Q96S86 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.03■□□□□ 0.16
HAPLN3Q96S86 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.03■□□□□ 0.16
HAPLN3Q96S86 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.03■□□□□ 0.16
HAPLN3Q96S86 AC134915.1-201ENST00000426461 574 ntBASIC16.03■□□□□ 0.16
HAPLN3Q96S86 VDAC1P7-201ENST00000462417 847 ntBASIC16.03■□□□□ 0.16
HAPLN3Q96S86 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.03■□□□□ 0.16
HAPLN3Q96S86 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.03■□□□□ 0.16
HAPLN3Q96S86 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HAPLN3Q96S86 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HAPLN3Q96S86 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
HAPLN3Q96S86 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HAPLN3Q96S86 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.03■□□□□ 0.16
HAPLN3Q96S86 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.03■□□□□ 0.16
HAPLN3Q96S86 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
HAPLN3Q96S86 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
HAPLN3Q96S86 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
HAPLN3Q96S86 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 INTS4P2-202ENST00000614726 2019 ntBASIC16.02■□□□□ 0.16
HAPLN3Q96S86 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 SNX18-202ENST00000343017 3140 ntBASIC16.02■□□□□ 0.16
HAPLN3Q96S86 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 AL035633.1-201ENST00000406139 838 ntBASIC16.02■□□□□ 0.16
HAPLN3Q96S86 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 CTBP2P3-201ENST00000585629 1255 ntBASIC16.02■□□□□ 0.16
HAPLN3Q96S86 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 AC093813.1-201ENST00000605066 256 ntBASIC16.02■□□□□ 0.16
HAPLN3Q96S86 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.02■□□□□ 0.16
HAPLN3Q96S86 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HAPLN3Q96S86 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
HAPLN3Q96S86 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.02■□□□□ 0.15
HAPLN3Q96S86 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HAPLN3Q96S86 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HAPLN3Q96S86 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HAPLN3Q96S86 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HAPLN3Q96S86 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
HAPLN3Q96S86 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
HAPLN3Q96S86 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HAPLN3Q96S86 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.02■□□□□ 0.15
HAPLN3Q96S86 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HAPLN3Q96S86 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms