Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 TEX28P2-201ENST00000617764 1221 ntBASIC14.72□□□□□ -0.05
COL21A1Q96P44 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL21A1Q96P44 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
COL21A1Q96P44 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL21A1Q96P44 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.72□□□□□ -0.05
COL21A1Q96P44 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
COL21A1Q96P44 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.72□□□□□ -0.05
COL21A1Q96P44 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.72□□□□□ -0.05
COL21A1Q96P44 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
COL21A1Q96P44 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL21A1Q96P44 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.72□□□□□ -0.05
COL21A1Q96P44 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.72□□□□□ -0.05
COL21A1Q96P44 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL21A1Q96P44 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL21A1Q96P44 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL21A1Q96P44 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL21A1Q96P44 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
COL21A1Q96P44 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.71□□□□□ -0.05
COL21A1Q96P44 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
COL21A1Q96P44 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
COL21A1Q96P44 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL21A1Q96P44 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL21A1Q96P44 AL365209.1-201ENST00000624418 6473 ntBASIC14.71□□□□□ -0.05
COL21A1Q96P44 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL21A1Q96P44 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL21A1Q96P44 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL21A1Q96P44 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL21A1Q96P44 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
COL21A1Q96P44 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL21A1Q96P44 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL21A1Q96P44 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
COL21A1Q96P44 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL21A1Q96P44 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL21A1Q96P44 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.71□□□□□ -0.05
COL21A1Q96P44 CICP23-201ENST00000605013 2741 ntBASIC14.71□□□□□ -0.05
COL21A1Q96P44 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL21A1Q96P44 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL21A1Q96P44 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.71□□□□□ -0.05
COL21A1Q96P44 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.71□□□□□ -0.05
COL21A1Q96P44 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.71□□□□□ -0.05
COL21A1Q96P44 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
COL21A1Q96P44 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.71□□□□□ -0.05
COL21A1Q96P44 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.71□□□□□ -0.05
COL21A1Q96P44 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.71□□□□□ -0.05
COL21A1Q96P44 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.71□□□□□ -0.05
COL21A1Q96P44 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
COL21A1Q96P44 MIR6069-201ENST00000620069 79 ntBASIC14.71□□□□□ -0.05
COL21A1Q96P44 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.71□□□□□ -0.05
COL21A1Q96P44 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
COL21A1Q96P44 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL21A1Q96P44 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.71□□□□□ -0.05
COL21A1Q96P44 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.71□□□□□ -0.05
COL21A1Q96P44 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL21A1Q96P44 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
COL21A1Q96P44 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL21A1Q96P44 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL21A1Q96P44 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.06
COL21A1Q96P44 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
COL21A1Q96P44 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.71□□□□□ -0.06
COL21A1Q96P44 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
COL21A1Q96P44 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
COL21A1Q96P44 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
COL21A1Q96P44 OR2I1P-209ENST00000641730 5365 ntBASIC14.7□□□□□ -0.06
COL21A1Q96P44 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL21A1Q96P44 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
COL21A1Q96P44 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
COL21A1Q96P44 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
COL21A1Q96P44 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL21A1Q96P44 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL21A1Q96P44 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL21A1Q96P44 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.7□□□□□ -0.06
COL21A1Q96P44 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL21A1Q96P44 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
COL21A1Q96P44 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL21A1Q96P44 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL21A1Q96P44 GRK6P1-201ENST00000400595 1711 ntBASIC14.7□□□□□ -0.06
COL21A1Q96P44 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
COL21A1Q96P44 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.7□□□□□ -0.06
COL21A1Q96P44 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL21A1Q96P44 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL21A1Q96P44 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.7□□□□□ -0.06
COL21A1Q96P44 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.7□□□□□ -0.06
COL21A1Q96P44 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL21A1Q96P44 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.7□□□□□ -0.06
COL21A1Q96P44 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.7□□□□□ -0.06
COL21A1Q96P44 AC241585.1-201ENST00000433527 519 ntBASIC14.7□□□□□ -0.06
COL21A1Q96P44 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.7□□□□□ -0.06
COL21A1Q96P44 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.7□□□□□ -0.06
COL21A1Q96P44 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.7□□□□□ -0.06
COL21A1Q96P44 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.7□□□□□ -0.06
COL21A1Q96P44 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.7□□□□□ -0.06
COL21A1Q96P44 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL21A1Q96P44 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.7□□□□□ -0.06
COL21A1Q96P44 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.7□□□□□ -0.06
COL21A1Q96P44 AL390754.1-201ENST00000619088 582 ntBASIC14.7□□□□□ -0.06
COL21A1Q96P44 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.7□□□□□ -0.06
COL21A1Q96P44 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
COL21A1Q96P44 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
COL21A1Q96P44 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.7□□□□□ -0.06
COL21A1Q96P44 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms