Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RPRD1AQ96P16 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.96■□□□□ 0.15
RPRD1AQ96P16 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
RPRD1AQ96P16 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RPRD1AQ96P16 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RPRD1AQ96P16 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RPRD1AQ96P16 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RPRD1AQ96P16 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.96■□□□□ 0.15
RPRD1AQ96P16 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.96■□□□□ 0.15
RPRD1AQ96P16 AC132938.2-201ENST00000579188 680 ntBASIC15.96■□□□□ 0.15
RPRD1AQ96P16 AC093813.1-201ENST00000605066 256 ntBASIC15.96■□□□□ 0.15
RPRD1AQ96P16 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.96■□□□□ 0.15
RPRD1AQ96P16 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.96■□□□□ 0.15
RPRD1AQ96P16 AL591163.1-201ENST00000641757 987 ntBASIC15.96■□□□□ 0.15
RPRD1AQ96P16 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.96■□□□□ 0.15
RPRD1AQ96P16 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RPRD1AQ96P16 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.96■□□□□ 0.15
RPRD1AQ96P16 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RPRD1AQ96P16 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.96■□□□□ 0.15
RPRD1AQ96P16 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.96■□□□□ 0.15
RPRD1AQ96P16 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.96■□□□□ 0.15
RPRD1AQ96P16 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
RPRD1AQ96P16 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RPRD1AQ96P16 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RPRD1AQ96P16 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.96■□□□□ 0.14
RPRD1AQ96P16 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
RPRD1AQ96P16 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RPRD1AQ96P16 SSR4P1-203ENST00000599569 2260 ntBASIC15.96■□□□□ 0.14
RPRD1AQ96P16 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 AC063926.2-201ENST00000623766 1308 ntBASIC15.95■□□□□ 0.14
RPRD1AQ96P16 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 GAPDHP40-201ENST00000505218 1006 ntBASIC15.95■□□□□ 0.14
RPRD1AQ96P16 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 ENPP7P5-201ENST00000541031 1031 ntBASIC15.95■□□□□ 0.14
RPRD1AQ96P16 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 IGHV3-72-202ENST00000621503 303 ntBASIC15.95■□□□□ 0.14
RPRD1AQ96P16 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
RPRD1AQ96P16 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 AC010319.3-201ENST00000597028 470 ntBASIC15.94■□□□□ 0.14
RPRD1AQ96P16 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.94■□□□□ 0.14
RPRD1AQ96P16 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms