Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
IFT43Q96FT9 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
IFT43Q96FT9 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.05■□□□□ 0.16
IFT43Q96FT9 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.05■□□□□ 0.16
IFT43Q96FT9 MIR4313-201ENST00000580760 101 ntBASIC16.05■□□□□ 0.16
IFT43Q96FT9 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
IFT43Q96FT9 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.05■□□□□ 0.16
IFT43Q96FT9 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
IFT43Q96FT9 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.05■□□□□ 0.16
IFT43Q96FT9 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
IFT43Q96FT9 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
IFT43Q96FT9 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
IFT43Q96FT9 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.05■□□□□ 0.16
IFT43Q96FT9 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.05■□□□□ 0.16
IFT43Q96FT9 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.05■□□□□ 0.16
IFT43Q96FT9 GRK6P1-201ENST00000400595 1711 ntBASIC16.05■□□□□ 0.16
IFT43Q96FT9 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
IFT43Q96FT9 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IFT43Q96FT9 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.05■□□□□ 0.16
IFT43Q96FT9 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.05■□□□□ 0.16
IFT43Q96FT9 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
IFT43Q96FT9 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
IFT43Q96FT9 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFT43Q96FT9 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.04■□□□□ 0.16
IFT43Q96FT9 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFT43Q96FT9 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
IFT43Q96FT9 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.04■□□□□ 0.16
IFT43Q96FT9 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
IFT43Q96FT9 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
IFT43Q96FT9 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFT43Q96FT9 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
IFT43Q96FT9 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.04■□□□□ 0.16
IFT43Q96FT9 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.04■□□□□ 0.16
IFT43Q96FT9 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.04■□□□□ 0.16
IFT43Q96FT9 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFT43Q96FT9 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFT43Q96FT9 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
IFT43Q96FT9 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFT43Q96FT9 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFT43Q96FT9 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFT43Q96FT9 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
IFT43Q96FT9 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
IFT43Q96FT9 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
IFT43Q96FT9 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.04■□□□□ 0.16
IFT43Q96FT9 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.04■□□□□ 0.16
IFT43Q96FT9 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.04■□□□□ 0.16
IFT43Q96FT9 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.04■□□□□ 0.16
IFT43Q96FT9 AP005018.1-201ENST00000525475 301 ntBASIC16.04■□□□□ 0.16
IFT43Q96FT9 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
IFT43Q96FT9 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFT43Q96FT9 AL137784.3-201ENST00000623858 2288 ntBASIC16.04■□□□□ 0.16
IFT43Q96FT9 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFT43Q96FT9 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
IFT43Q96FT9 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFT43Q96FT9 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFT43Q96FT9 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
IFT43Q96FT9 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFT43Q96FT9 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
IFT43Q96FT9 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
IFT43Q96FT9 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFT43Q96FT9 AL161772.1-201ENST00000610494 4412 ntBASIC16.04■□□□□ 0.16
IFT43Q96FT9 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFT43Q96FT9 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.04■□□□□ 0.16
IFT43Q96FT9 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.04■□□□□ 0.16
IFT43Q96FT9 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.04■□□□□ 0.16
IFT43Q96FT9 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFT43Q96FT9 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFT43Q96FT9 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.04■□□□□ 0.16
IFT43Q96FT9 PCDHA3-202ENST00000532566 4594 ntBASIC16.04■□□□□ 0.16
IFT43Q96FT9 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
IFT43Q96FT9 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFT43Q96FT9 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
IFT43Q96FT9 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
IFT43Q96FT9 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFT43Q96FT9 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.03■□□□□ 0.16
IFT43Q96FT9 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IFT43Q96FT9 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.03■□□□□ 0.16
IFT43Q96FT9 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
IFT43Q96FT9 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IFT43Q96FT9 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IFT43Q96FT9 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
IFT43Q96FT9 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IFT43Q96FT9 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
IFT43Q96FT9 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IFT43Q96FT9 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
IFT43Q96FT9 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IFT43Q96FT9 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IFT43Q96FT9 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
IFT43Q96FT9 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
IFT43Q96FT9 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
IFT43Q96FT9 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
IFT43Q96FT9 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
IFT43Q96FT9 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IFT43Q96FT9 AL353779.1-201ENST00000434793 351 ntBASIC16.03■□□□□ 0.16
IFT43Q96FT9 HIST3H2BA-201ENST00000436555 524 ntBASIC16.03■□□□□ 0.16
IFT43Q96FT9 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.03■□□□□ 0.16
IFT43Q96FT9 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.03■□□□□ 0.16
IFT43Q96FT9 HNRNPUP1-201ENST00000554987 333 ntBASIC16.03■□□□□ 0.16
IFT43Q96FT9 AC008738.7-201ENST00000609744 511 ntBASIC16.03■□□□□ 0.16
IFT43Q96FT9 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms