Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRIM11Q96F44 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM11Q96F44 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM11Q96F44 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM11Q96F44 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM11Q96F44 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM11Q96F44 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM11Q96F44 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM11Q96F44 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM11Q96F44 FAM45BP-202ENST00000592932 1624 ntBASIC16.42■□□□□ 0.22
TRIM11Q96F44 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM11Q96F44 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM11Q96F44 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM11Q96F44 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM11Q96F44 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM11Q96F44 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM11Q96F44 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM11Q96F44 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.42■□□□□ 0.22
TRIM11Q96F44 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.42■□□□□ 0.22
TRIM11Q96F44 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRIM11Q96F44 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM11Q96F44 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM11Q96F44 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.42■□□□□ 0.22
TRIM11Q96F44 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM11Q96F44 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.42■□□□□ 0.22
TRIM11Q96F44 AC025181.2-201ENST00000606994 802 ntBASIC16.42■□□□□ 0.22
TRIM11Q96F44 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM11Q96F44 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.42■□□□□ 0.22
TRIM11Q96F44 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM11Q96F44 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TRIM11Q96F44 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM11Q96F44 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
TRIM11Q96F44 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM11Q96F44 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM11Q96F44 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TRIM11Q96F44 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM11Q96F44 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM11Q96F44 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM11Q96F44 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM11Q96F44 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.41■□□□□ 0.22
TRIM11Q96F44 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM11Q96F44 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM11Q96F44 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM11Q96F44 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM11Q96F44 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM11Q96F44 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM11Q96F44 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.41■□□□□ 0.22
TRIM11Q96F44 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TRIM11Q96F44 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM11Q96F44 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM11Q96F44 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.41■□□□□ 0.22
TRIM11Q96F44 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM11Q96F44 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM11Q96F44 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRIM11Q96F44 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM11Q96F44 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM11Q96F44 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRIM11Q96F44 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.41■□□□□ 0.22
TRIM11Q96F44 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM11Q96F44 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.41■□□□□ 0.22
TRIM11Q96F44 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.41■□□□□ 0.22
TRIM11Q96F44 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM11Q96F44 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
TRIM11Q96F44 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.41■□□□□ 0.22
TRIM11Q96F44 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM11Q96F44 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TRIM11Q96F44 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM11Q96F44 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.41■□□□□ 0.22
TRIM11Q96F44 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.41■□□□□ 0.22
TRIM11Q96F44 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.41■□□□□ 0.22
TRIM11Q96F44 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TRIM11Q96F44 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM11Q96F44 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM11Q96F44 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRIM11Q96F44 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM11Q96F44 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM11Q96F44 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM11Q96F44 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM11Q96F44 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM11Q96F44 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM11Q96F44 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM11Q96F44 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM11Q96F44 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM11Q96F44 AC012508.2-201ENST00000567613 1472 ntBASIC16.41■□□□□ 0.22
TRIM11Q96F44 AL161772.1-201ENST00000610494 4412 ntBASIC16.41■□□□□ 0.22
TRIM11Q96F44 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM11Q96F44 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM11Q96F44 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TRIM11Q96F44 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.41■□□□□ 0.22
TRIM11Q96F44 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM11Q96F44 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM11Q96F44 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
TRIM11Q96F44 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM11Q96F44 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRIM11Q96F44 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRIM11Q96F44 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM11Q96F44 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRIM11Q96F44 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM11Q96F44 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TRIM11Q96F44 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms