Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.48■□□□□ 0.23
DDX1Q92499 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
DDX1Q92499 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DDX1Q92499 AJ011931.1-201ENST00000618749 2492 ntBASIC16.47■□□□□ 0.23
DDX1Q92499 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
DDX1Q92499 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DDX1Q92499 REXO1L2P-201ENST00000425429 2069 ntBASIC16.47■□□□□ 0.23
DDX1Q92499 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
DDX1Q92499 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DDX1Q92499 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DDX1Q92499 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.47■□□□□ 0.23
DDX1Q92499 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
DDX1Q92499 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.47■□□□□ 0.23
DDX1Q92499 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.47■□□□□ 0.23
DDX1Q92499 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.47■□□□□ 0.23
DDX1Q92499 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DDX1Q92499 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
DDX1Q92499 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DDX1Q92499 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
DDX1Q92499 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DDX1Q92499 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
DDX1Q92499 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.47■□□□□ 0.23
DDX1Q92499 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.47■□□□□ 0.23
DDX1Q92499 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DDX1Q92499 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
DDX1Q92499 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
DDX1Q92499 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.47■□□□□ 0.23
DDX1Q92499 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.47■□□□□ 0.23
DDX1Q92499 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.47■□□□□ 0.23
DDX1Q92499 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
DDX1Q92499 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.47■□□□□ 0.23
DDX1Q92499 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DDX1Q92499 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.47■□□□□ 0.23
DDX1Q92499 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.47■□□□□ 0.23
DDX1Q92499 INE1-201ENST00000456273 945 ntBASIC16.47■□□□□ 0.23
DDX1Q92499 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.47■□□□□ 0.23
DDX1Q92499 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.47■□□□□ 0.23
DDX1Q92499 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.47■□□□□ 0.23
DDX1Q92499 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.47■□□□□ 0.23
DDX1Q92499 KRT17P8-201ENST00000540749 863 ntBASIC16.47■□□□□ 0.23
DDX1Q92499 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.47■□□□□ 0.23
DDX1Q92499 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
DDX1Q92499 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
DDX1Q92499 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.47■□□□□ 0.23
DDX1Q92499 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.47■□□□□ 0.23
DDX1Q92499 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
DDX1Q92499 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
DDX1Q92499 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
DDX1Q92499 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
DDX1Q92499 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
DDX1Q92499 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DDX1Q92499 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
DDX1Q92499 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DDX1Q92499 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
DDX1Q92499 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
DDX1Q92499 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
DDX1Q92499 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
DDX1Q92499 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.46■□□□□ 0.23
DDX1Q92499 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
DDX1Q92499 ACE3P-201ENST00000423435 1973 ntBASIC16.46■□□□□ 0.23
DDX1Q92499 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.46■□□□□ 0.23
DDX1Q92499 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
DDX1Q92499 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.46■□□□□ 0.23
DDX1Q92499 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DDX1Q92499 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
DDX1Q92499 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
DDX1Q92499 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.46■□□□□ 0.23
DDX1Q92499 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DDX1Q92499 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DDX1Q92499 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
DDX1Q92499 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DDX1Q92499 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DDX1Q92499 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DDX1Q92499 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DDX1Q92499 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
DDX1Q92499 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.46■□□□□ 0.23
DDX1Q92499 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.46■□□□□ 0.23
DDX1Q92499 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.46■□□□□ 0.23
DDX1Q92499 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.46■□□□□ 0.23
DDX1Q92499 AC104794.3-201ENST00000566840 1248 ntBASIC16.46■□□□□ 0.23
DDX1Q92499 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.46■□□□□ 0.23
DDX1Q92499 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.46■□□□□ 0.23
DDX1Q92499 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DDX1Q92499 REXO1L4P-201ENST00000605109 1937 ntBASIC16.46■□□□□ 0.23
DDX1Q92499 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DDX1Q92499 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DDX1Q92499 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.46■□□□□ 0.23
DDX1Q92499 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.46■□□□□ 0.23
DDX1Q92499 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DDX1Q92499 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DDX1Q92499 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.46■□□□□ 0.23
DDX1Q92499 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
DDX1Q92499 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.22
DDX1Q92499 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
DDX1Q92499 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
DDX1Q92499 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.45■□□□□ 0.22
DDX1Q92499 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.45■□□□□ 0.22
DDX1Q92499 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DDX1Q92499 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DDX1Q92499 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms