Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCER1Q8TC90 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC23.21■■□□□ 1.31
CCER1Q8TC90 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCER1Q8TC90 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCER1Q8TC90 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCER1Q8TC90 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
CCER1Q8TC90 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
CCER1Q8TC90 UCKL1-AS1-201ENST00000623569 3602 ntBASIC23.2■■□□□ 1.31
CCER1Q8TC90 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCER1Q8TC90 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCER1Q8TC90 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC23.2■■□□□ 1.3
CCER1Q8TC90 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCER1Q8TC90 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC23.2■■□□□ 1.3
CCER1Q8TC90 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCER1Q8TC90 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCER1Q8TC90 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
CCER1Q8TC90 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCER1Q8TC90 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC23.2■■□□□ 1.3
CCER1Q8TC90 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC23.2■■□□□ 1.3
CCER1Q8TC90 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCER1Q8TC90 AL022342.1-201ENST00000400363 863 ntBASIC23.2■■□□□ 1.3
CCER1Q8TC90 RPL5P21-201ENST00000404620 815 ntBASIC23.2■■□□□ 1.3
CCER1Q8TC90 FO393414.2-201ENST00000405153 598 ntBASIC23.2■■□□□ 1.3
CCER1Q8TC90 SPDYE17-201ENST00000412399 783 ntBASIC23.2■■□□□ 1.3
CCER1Q8TC90 AC004461.1-201ENST00000412461 403 ntBASIC23.2■■□□□ 1.3
CCER1Q8TC90 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC23.2■■□□□ 1.3
CCER1Q8TC90 GPS2P2-201ENST00000430745 888 ntBASIC23.2■■□□□ 1.3
CCER1Q8TC90 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
CCER1Q8TC90 AC005829.1-201ENST00000570002 483 ntBASIC23.2■■□□□ 1.3
CCER1Q8TC90 AL513210.1-201ENST00000629608 234 ntBASIC23.2■■□□□ 1.3
CCER1Q8TC90 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCER1Q8TC90 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC23.2■■□□□ 1.3
CCER1Q8TC90 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CCER1Q8TC90 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCER1Q8TC90 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCER1Q8TC90 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCER1Q8TC90 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCER1Q8TC90 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCER1Q8TC90 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCER1Q8TC90 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCER1Q8TC90 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
CCER1Q8TC90 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC23.19■■□□□ 1.3
CCER1Q8TC90 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC23.19■■□□□ 1.3
CCER1Q8TC90 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCER1Q8TC90 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CCER1Q8TC90 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCER1Q8TC90 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
CCER1Q8TC90 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CCER1Q8TC90 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCER1Q8TC90 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC23.19■■□□□ 1.3
CCER1Q8TC90 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC23.19■■□□□ 1.3
CCER1Q8TC90 AL627223.1-201ENST00000416693 442 ntBASIC23.19■■□□□ 1.3
CCER1Q8TC90 RBPMS2P1-201ENST00000437762 623 ntBASIC23.19■■□□□ 1.3
CCER1Q8TC90 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC23.19■■□□□ 1.3
CCER1Q8TC90 LITAF-210ENST00000571976 548 ntTSL 2 BASIC23.19■■□□□ 1.3
CCER1Q8TC90 LITAF-214ENST00000574703 486 ntTSL 2 BASIC23.19■■□□□ 1.3
CCER1Q8TC90 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC23.19■■□□□ 1.3
CCER1Q8TC90 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCER1Q8TC90 RN7SL828P-201ENST00000607615 303 ntBASIC23.19■■□□□ 1.3
CCER1Q8TC90 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCER1Q8TC90 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CCER1Q8TC90 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC23.19■■□□□ 1.3
CCER1Q8TC90 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCER1Q8TC90 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCER1Q8TC90 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC23.19■■□□□ 1.3
CCER1Q8TC90 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
CCER1Q8TC90 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC23.19■■□□□ 1.3
CCER1Q8TC90 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCER1Q8TC90 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCER1Q8TC90 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCER1Q8TC90 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCER1Q8TC90 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCER1Q8TC90 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCER1Q8TC90 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC23.18■■□□□ 1.3
CCER1Q8TC90 OR2I1P-210ENST00000642037 4691 ntBASIC23.18■■□□□ 1.3
CCER1Q8TC90 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC23.18■■□□□ 1.3
CCER1Q8TC90 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
CCER1Q8TC90 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC23.18■■□□□ 1.3
CCER1Q8TC90 MTND6P24-201ENST00000440466 518 ntBASIC23.18■■□□□ 1.3
CCER1Q8TC90 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC23.18■■□□□ 1.3
CCER1Q8TC90 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC23.18■■□□□ 1.3
CCER1Q8TC90 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC23.18■■□□□ 1.3
CCER1Q8TC90 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCER1Q8TC90 AC117489.1-201ENST00000625169 3217 ntBASIC23.18■■□□□ 1.3
CCER1Q8TC90 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCER1Q8TC90 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCER1Q8TC90 PCDHGB8P-201ENST00000502926 1973 ntBASIC23.18■■□□□ 1.3
CCER1Q8TC90 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCER1Q8TC90 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCER1Q8TC90 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCER1Q8TC90 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC23.17■■□□□ 1.3
CCER1Q8TC90 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCER1Q8TC90 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC23.17■■□□□ 1.3
CCER1Q8TC90 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC23.17■■□□□ 1.3
CCER1Q8TC90 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
CCER1Q8TC90 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCER1Q8TC90 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC23.17■■□□□ 1.3
CCER1Q8TC90 WASH3P-207ENST00000560956 1394 ntBASIC23.17■■□□□ 1.3
CCER1Q8TC90 FO538757.1-201ENST00000623083 1397 ntBASIC23.17■■□□□ 1.3
CCER1Q8TC90 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms