Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 AC148477.4-201ENST00000613430 1793 ntBASIC16.41■□□□□ 0.22
UBA3Q8TBC4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 AC023024.2-201ENST00000623561 1993 ntBASIC16.4■□□□□ 0.22
UBA3Q8TBC4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
UBA3Q8TBC4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBA3Q8TBC4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.4■□□□□ 0.22
UBA3Q8TBC4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBA3Q8TBC4 KRT8P44-201ENST00000441609 1350 ntBASIC16.4■□□□□ 0.22
UBA3Q8TBC4 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBA3Q8TBC4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.4■□□□□ 0.22
UBA3Q8TBC4 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBA3Q8TBC4 AC091951.1-201ENST00000512854 2465 ntBASIC16.4■□□□□ 0.22
UBA3Q8TBC4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.4■□□□□ 0.22
UBA3Q8TBC4 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
UBA3Q8TBC4 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBA3Q8TBC4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
UBA3Q8TBC4 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBA3Q8TBC4 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBA3Q8TBC4 DRD5P1-201ENST00000456605 1438 ntBASIC16.4■□□□□ 0.22
UBA3Q8TBC4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.4■□□□□ 0.22
UBA3Q8TBC4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBA3Q8TBC4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBA3Q8TBC4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBA3Q8TBC4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.4■□□□□ 0.22
UBA3Q8TBC4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.4■□□□□ 0.22
UBA3Q8TBC4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.4■□□□□ 0.22
UBA3Q8TBC4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.4■□□□□ 0.22
UBA3Q8TBC4 BRI3BPP1-201ENST00000594224 787 ntBASIC16.4■□□□□ 0.22
UBA3Q8TBC4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.4■□□□□ 0.22
UBA3Q8TBC4 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBA3Q8TBC4 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBA3Q8TBC4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.4■□□□□ 0.22
UBA3Q8TBC4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.4■□□□□ 0.22
UBA3Q8TBC4 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBA3Q8TBC4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBA3Q8TBC4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBA3Q8TBC4 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBA3Q8TBC4 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
UBA3Q8TBC4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
UBA3Q8TBC4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.39■□□□□ 0.22
UBA3Q8TBC4 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
UBA3Q8TBC4 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBA3Q8TBC4 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
UBA3Q8TBC4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBA3Q8TBC4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBA3Q8TBC4 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
UBA3Q8TBC4 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.38■□□□□ 0.21
UBA3Q8TBC4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.38■□□□□ 0.21
UBA3Q8TBC4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.38■□□□□ 0.21
UBA3Q8TBC4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBA3Q8TBC4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBA3Q8TBC4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms