Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 HAUS4P1-201ENST00000406739 1145 ntBASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.24□□□□□ -0.29
CLDND2Q8NHS1 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 AC023908.3-201ENST00000564211 3047 ntBASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 AP001282.1-201ENST00000531301 1499 ntBASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 ARSEP1-201ENST00000420443 635 ntBASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 TARDBPP1-201ENST00000442013 1203 ntBASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 TTTY23B-201ENST00000442790 549 ntBASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 IGHV3-71-201ENST00000523324 359 ntBASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 HILS1-202ENST00000545329 423 ntBASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 TMEM261P1-201ENST00000604899 340 ntBASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 WFDC1-204ENST00000613603 549 ntBASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 MIR8072-201ENST00000614241 80 ntBASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDND2Q8NHS1 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms