Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 AL078644.1-201ENST00000609881 752 ntBASIC15.16■□□□□ 0.02
HIPK4Q8NE63 MIR7706-201ENST00000613747 67 ntBASIC15.16■□□□□ 0.02
HIPK4Q8NE63 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 AC027601.5-201ENST00000624065 2482 ntBASIC15.15■□□□□ 0.02
HIPK4Q8NE63 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 AL031284.1-201ENST00000419297 478 ntBASIC15.15■□□□□ 0.02
HIPK4Q8NE63 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 AC009947.1-201ENST00000444350 727 ntBASIC15.15■□□□□ 0.02
HIPK4Q8NE63 AC079781.3-201ENST00000449110 356 ntBASIC15.15■□□□□ 0.02
HIPK4Q8NE63 HCG4B-203ENST00000450128 991 ntBASIC15.15■□□□□ 0.02
HIPK4Q8NE63 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 UNC93B6-202ENST00000528242 690 ntBASIC15.15■□□□□ 0.02
HIPK4Q8NE63 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 AC096734.2-201ENST00000562054 433 ntBASIC15.15■□□□□ 0.02
HIPK4Q8NE63 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC15.15■□□□□ 0.02
HIPK4Q8NE63 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 AC004870.1-201ENST00000315132 882 ntBASIC15.14■□□□□ 0.01
HIPK4Q8NE63 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 RHOQP3-201ENST00000437982 621 ntBASIC15.14■□□□□ 0.01
HIPK4Q8NE63 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms