Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 LINC02228-204ENST00000642115 2962 ntBASIC13.61□□□□□ -0.23
CPEB3Q8NE35 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 AL133267.1-201ENST00000398220 340 ntBASIC13.6□□□□□ -0.23
CPEB3Q8NE35 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 GNAQP1-201ENST00000444815 1067 ntBASIC13.6□□□□□ -0.23
CPEB3Q8NE35 TSPY16P-201ENST00000449843 468 ntBASIC13.6□□□□□ -0.23
CPEB3Q8NE35 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 DOC2GP-202ENST00000514950 1163 ntBASIC13.6□□□□□ -0.23
CPEB3Q8NE35 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 AC009118.2-201ENST00000613275 655 ntBASIC13.6□□□□□ -0.23
CPEB3Q8NE35 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.6□□□□□ -0.23
CPEB3Q8NE35 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 AC104640.1-201ENST00000562617 2109 ntBASIC13.6□□□□□ -0.23
CPEB3Q8NE35 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CPEB3Q8NE35 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 AC138035.3-201ENST00000622706 2791 ntBASIC13.59□□□□□ -0.23
CPEB3Q8NE35 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms