Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
COLGALT1Q8NBJ5 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
COLGALT1Q8NBJ5 KRT8P35-201ENST00000483942 1338 ntBASIC16.67■□□□□ 0.26
COLGALT1Q8NBJ5 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COLGALT1Q8NBJ5 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
COLGALT1Q8NBJ5 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.67■□□□□ 0.26
COLGALT1Q8NBJ5 AC011477.6-201ENST00000604980 1927 ntBASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 AL138799.1-201ENST00000448213 1675 ntBASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 AL138709.1-201ENST00000614840 1693 ntBASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 Z93015.1-201ENST00000451718 390 ntBASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 AL162727.3-201ENST00000635661 2787 ntBASIC16.66■□□□□ 0.26
COLGALT1Q8NBJ5 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 AL022328.3-201ENST00000607943 679 ntBASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 BX539320.1-201ENST00000623759 877 ntBASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 AC132938.4-201ENST00000623835 848 ntBASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 AHCYP2-201ENST00000430630 1300 ntBASIC16.65■□□□□ 0.26
COLGALT1Q8NBJ5 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms