Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 IGHV3-42-201ENST00000520410 361 ntBASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 DUX4L27-201ENST00000554796 1261 ntBASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 AC015910.1-201ENST00000579400 975 ntBASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 AL844908.2-201ENST00000609461 460 ntBASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 AF228730.6-201ENST00000641497 218 ntBASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 AC084121.3-201ENST00000641716 218 ntBASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 AL109936.8-201ENST00000641772 604 ntBASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 PCDHA3-202ENST00000532566 4594 ntBASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 AC138969.3-201ENST00000546612 1459 ntBASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 AC138932.2-201ENST00000548268 1459 ntBASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 AC126755.4-201ENST00000549796 1459 ntBASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 BTBD7P1-201ENST00000447253 1453 ntBASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 AC055876.3-201ENST00000431496 288 ntBASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 TIMM17BP1-201ENST00000545713 516 ntBASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 AC044860.1-202ENST00000559481 777 ntBASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 LINC01115-203ENST00000606068 577 ntBASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 AC138649.4-201ENST00000612222 287 ntBASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
TTC9CQ8N5M4 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms