Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 AL512384.1-201ENST00000406683 331 ntBASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 INE1-201ENST00000456273 945 ntBASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 MIR8072-201ENST00000614241 80 ntBASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 AP002414.2-201ENST00000591780 3365 ntBASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 AC092552.1-201ENST00000547243 906 ntBASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 AL603832.2-201ENST00000566195 2125 ntBASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM48Q8IWZ4 AL121723.1-201ENST00000445194 1519 ntBASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 MIR4313-201ENST00000580760 101 ntBASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms