Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 CES1P1-201ENST00000421606 1704 ntBASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD2Q8IV50 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 AC020658.7-201ENST00000624274 2442 ntBASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 RBM17P3-201ENST00000417687 1192 ntBASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 MTDHP3-201ENST00000594186 672 ntBASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 MTDHP4-201ENST00000600287 670 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms