Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.09■□□□□ 0.65
COL23A1Q86Y22 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL23A1Q86Y22 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
COL23A1Q86Y22 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL23A1Q86Y22 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL23A1Q86Y22 AC244394.1-201ENST00000435000 1665 ntBASIC19.08■□□□□ 0.65
COL23A1Q86Y22 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.08■□□□□ 0.65
COL23A1Q86Y22 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
COL23A1Q86Y22 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL23A1Q86Y22 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL23A1Q86Y22 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC19.08■□□□□ 0.65
COL23A1Q86Y22 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
COL23A1Q86Y22 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL23A1Q86Y22 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
COL23A1Q86Y22 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL23A1Q86Y22 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC19.08■□□□□ 0.64
COL23A1Q86Y22 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
COL23A1Q86Y22 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
COL23A1Q86Y22 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL23A1Q86Y22 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC19.08■□□□□ 0.64
COL23A1Q86Y22 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC19.08■□□□□ 0.64
COL23A1Q86Y22 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC19.08■□□□□ 0.64
COL23A1Q86Y22 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC19.08■□□□□ 0.64
COL23A1Q86Y22 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC19.08■□□□□ 0.64
COL23A1Q86Y22 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
COL23A1Q86Y22 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL23A1Q86Y22 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC19.08■□□□□ 0.64
COL23A1Q86Y22 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL23A1Q86Y22 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL23A1Q86Y22 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
COL23A1Q86Y22 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL23A1Q86Y22 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL23A1Q86Y22 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.08■□□□□ 0.64
COL23A1Q86Y22 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.08■□□□□ 0.64
COL23A1Q86Y22 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.64
COL23A1Q86Y22 FLJ38576-201ENST00000623820 2459 ntBASIC19.08■□□□□ 0.64
COL23A1Q86Y22 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
COL23A1Q86Y22 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL23A1Q86Y22 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL23A1Q86Y22 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
COL23A1Q86Y22 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC19.07■□□□□ 0.64
COL23A1Q86Y22 AC138932.1-201ENST00000534164 6830 ntBASIC19.07■□□□□ 0.64
COL23A1Q86Y22 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL23A1Q86Y22 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC19.07■□□□□ 0.64
COL23A1Q86Y22 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
COL23A1Q86Y22 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC19.07■□□□□ 0.64
COL23A1Q86Y22 AL008718.2-201ENST00000609206 1313 ntBASIC19.07■□□□□ 0.64
COL23A1Q86Y22 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL23A1Q86Y22 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.07■□□□□ 0.64
COL23A1Q86Y22 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL23A1Q86Y22 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC19.07■□□□□ 0.64
COL23A1Q86Y22 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC19.07■□□□□ 0.64
COL23A1Q86Y22 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL23A1Q86Y22 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL23A1Q86Y22 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
COL23A1Q86Y22 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC19.07■□□□□ 0.64
COL23A1Q86Y22 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC19.07■□□□□ 0.64
COL23A1Q86Y22 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL23A1Q86Y22 AC026320.2-201ENST00000434379 478 ntBASIC19.07■□□□□ 0.64
COL23A1Q86Y22 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL23A1Q86Y22 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC19.07■□□□□ 0.64
COL23A1Q86Y22 AC130709.1-201ENST00000484779 1212 ntBASIC19.07■□□□□ 0.64
COL23A1Q86Y22 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC19.07■□□□□ 0.64
COL23A1Q86Y22 CDC23-208ENST00000505120 455 ntTSL 3 BASIC19.07■□□□□ 0.64
COL23A1Q86Y22 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC19.07■□□□□ 0.64
COL23A1Q86Y22 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC19.07■□□□□ 0.64
COL23A1Q86Y22 MIR6858-201ENST00000620733 67 ntBASIC19.07■□□□□ 0.64
COL23A1Q86Y22 KRT8P21-201ENST00000430398 1491 ntBASIC19.07■□□□□ 0.64
COL23A1Q86Y22 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
COL23A1Q86Y22 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL23A1Q86Y22 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL23A1Q86Y22 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL23A1Q86Y22 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL23A1Q86Y22 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL23A1Q86Y22 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL23A1Q86Y22 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC19.06■□□□□ 0.64
COL23A1Q86Y22 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL23A1Q86Y22 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL23A1Q86Y22 AC136759.1-202ENST00000530858 2194 ntBASIC19.06■□□□□ 0.64
COL23A1Q86Y22 AC124067.4-201ENST00000519691 2379 ntBASIC19.06■□□□□ 0.64
COL23A1Q86Y22 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC19.06■□□□□ 0.64
COL23A1Q86Y22 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL23A1Q86Y22 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
COL23A1Q86Y22 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
COL23A1Q86Y22 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL23A1Q86Y22 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
COL23A1Q86Y22 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL23A1Q86Y22 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL23A1Q86Y22 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL23A1Q86Y22 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC19.06■□□□□ 0.64
COL23A1Q86Y22 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC19.06■□□□□ 0.64
COL23A1Q86Y22 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL23A1Q86Y22 AL132780.4-201ENST00000624870 1135 ntBASIC19.06■□□□□ 0.64
COL23A1Q86Y22 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL23A1Q86Y22 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL23A1Q86Y22 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL23A1Q86Y22 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL23A1Q86Y22 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC19.06■□□□□ 0.64
COL23A1Q86Y22 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.06■□□□□ 0.64
COL23A1Q86Y22 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms