Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PACS2Q86VP3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.75■□□□□ 0.11
PACS2Q86VP3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PACS2Q86VP3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.75■□□□□ 0.11
PACS2Q86VP3 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PACS2Q86VP3 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PACS2Q86VP3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.74■□□□□ 0.11
PACS2Q86VP3 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PACS2Q86VP3 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PACS2Q86VP3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.74■□□□□ 0.11
PACS2Q86VP3 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
PACS2Q86VP3 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PACS2Q86VP3 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PACS2Q86VP3 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PACS2Q86VP3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PACS2Q86VP3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.74■□□□□ 0.11
PACS2Q86VP3 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PACS2Q86VP3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.74■□□□□ 0.11
PACS2Q86VP3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PACS2Q86VP3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.74■□□□□ 0.11
PACS2Q86VP3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.74■□□□□ 0.11
PACS2Q86VP3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.74■□□□□ 0.11
PACS2Q86VP3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.74■□□□□ 0.11
PACS2Q86VP3 AC013467.2-201ENST00000605472 835 ntBASIC15.74■□□□□ 0.11
PACS2Q86VP3 GGTLC5P-201ENST00000617623 998 ntBASIC15.74■□□□□ 0.11
PACS2Q86VP3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
PACS2Q86VP3 AL391262.2-201ENST00000622466 494 ntBASIC15.74■□□□□ 0.11
PACS2Q86VP3 AL805961.1-202ENST00000641562 540 ntBASIC15.74■□□□□ 0.11
PACS2Q86VP3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PACS2Q86VP3 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
PACS2Q86VP3 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PACS2Q86VP3 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PACS2Q86VP3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PACS2Q86VP3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PACS2Q86VP3 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PACS2Q86VP3 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PACS2Q86VP3 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PACS2Q86VP3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.74■□□□□ 0.11
PACS2Q86VP3 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PACS2Q86VP3 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PACS2Q86VP3 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC15.74■□□□□ 0.11
PACS2Q86VP3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PACS2Q86VP3 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PACS2Q86VP3 AC022762.2-201ENST00000600308 1353 ntBASIC15.74■□□□□ 0.11
PACS2Q86VP3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PACS2Q86VP3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.73■□□□□ 0.11
PACS2Q86VP3 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PACS2Q86VP3 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.73■□□□□ 0.11
PACS2Q86VP3 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PACS2Q86VP3 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PACS2Q86VP3 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PACS2Q86VP3 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PACS2Q86VP3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.73■□□□□ 0.11
PACS2Q86VP3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PACS2Q86VP3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PACS2Q86VP3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.73■□□□□ 0.11
PACS2Q86VP3 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PACS2Q86VP3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
PACS2Q86VP3 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.73■□□□□ 0.11
PACS2Q86VP3 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PACS2Q86VP3 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PACS2Q86VP3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PACS2Q86VP3 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC15.73■□□□□ 0.11
PACS2Q86VP3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PACS2Q86VP3 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PACS2Q86VP3 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PACS2Q86VP3 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PACS2Q86VP3 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PACS2Q86VP3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.73■□□□□ 0.11
PACS2Q86VP3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.73■□□□□ 0.11
PACS2Q86VP3 AP002414.1-201ENST00000391405 1147 ntBASIC15.73■□□□□ 0.11
PACS2Q86VP3 PTCHD3P3-201ENST00000403073 906 ntBASIC15.73■□□□□ 0.11
PACS2Q86VP3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.73■□□□□ 0.11
PACS2Q86VP3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.73■□□□□ 0.11
PACS2Q86VP3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PACS2Q86VP3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.73■□□□□ 0.11
PACS2Q86VP3 SLC25A1P1-201ENST00000528351 927 ntBASIC15.73■□□□□ 0.11
PACS2Q86VP3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.73■□□□□ 0.11
PACS2Q86VP3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PACS2Q86VP3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PACS2Q86VP3 AC008667.4-201ENST00000607370 168 ntBASIC15.73■□□□□ 0.11
PACS2Q86VP3 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC15.73■□□□□ 0.11
PACS2Q86VP3 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PACS2Q86VP3 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PACS2Q86VP3 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PACS2Q86VP3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PACS2Q86VP3 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PACS2Q86VP3 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PACS2Q86VP3 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PACS2Q86VP3 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PACS2Q86VP3 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.73■□□□□ 0.11
PACS2Q86VP3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.73■□□□□ 0.11
PACS2Q86VP3 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PACS2Q86VP3 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PACS2Q86VP3 EML1-203ENST00000334192 4064 ntTSL 5 BASIC15.73■□□□□ 0.11
PACS2Q86VP3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PACS2Q86VP3 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC15.72■□□□□ 0.11
PACS2Q86VP3 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC15.72■□□□□ 0.11
PACS2Q86VP3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PACS2Q86VP3 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms