Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 AC104109.2-201ENST00000602919 1418 ntBASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 AC004870.1-201ENST00000315132 882 ntBASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 AC117489.1-201ENST00000625169 3217 ntBASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRTM1Q86UE6 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 HSPA7-201ENST00000445535 1927 ntBASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 AC006504.5-208ENST00000588784 2401 ntBASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 LINC01225-203ENST00000563550 1244 ntBASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 AC092865.6-201ENST00000642101 219 ntBASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
LRRTM1Q86UE6 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms