Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 AP002414.2-201ENST00000591780 3365 ntBASIC14.05□□□□□ -0.16
ATG4DQ86TL0 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ATG4DQ86TL0 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 NORAD-201ENST00000565493 5339 ntBASIC14.04□□□□□ -0.16
ATG4DQ86TL0 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 SPTLC1P1-201ENST00000447199 261 ntBASIC14.04□□□□□ -0.16
ATG4DQ86TL0 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms