Protein–RNA interactions for Protein: Q7Z3S7

CACNA2D4, Voltage-dependent calcium channel subunit alpha-2/delta-4, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4Q7Z3S7 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA2D4Q7Z3S7 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CACNA2D4Q7Z3S7 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA2D4Q7Z3S7 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CACNA2D4Q7Z3S7 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA2D4Q7Z3S7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.11■□□□□ 0.33
CACNA2D4Q7Z3S7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.11■□□□□ 0.33
CACNA2D4Q7Z3S7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA2D4Q7Z3S7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA2D4Q7Z3S7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.11■□□□□ 0.33
CACNA2D4Q7Z3S7 FAM207CP-201ENST00000443486 507 ntBASIC17.11■□□□□ 0.33
CACNA2D4Q7Z3S7 GAPDHP21-201ENST00000450301 1010 ntBASIC17.11■□□□□ 0.33
CACNA2D4Q7Z3S7 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.11■□□□□ 0.33
CACNA2D4Q7Z3S7 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.11■□□□□ 0.33
CACNA2D4Q7Z3S7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.11■□□□□ 0.33
CACNA2D4Q7Z3S7 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA2D4Q7Z3S7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA2D4Q7Z3S7 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CACNA2D4Q7Z3S7 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA2D4Q7Z3S7 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.11■□□□□ 0.33
CACNA2D4Q7Z3S7 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
CACNA2D4Q7Z3S7 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA2D4Q7Z3S7 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA2D4Q7Z3S7 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.11■□□□□ 0.33
CACNA2D4Q7Z3S7 KCP-203ENST00000610776 5108 ntTSL 5 BASIC17.11■□□□□ 0.33
CACNA2D4Q7Z3S7 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA2D4Q7Z3S7 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA2D4Q7Z3S7 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 AC148477.4-201ENST00000613430 1793 ntBASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 AC125807.1-201ENST00000483097 614 ntBASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 HNRNPUP1-201ENST00000554987 333 ntBASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 AC084121.4-201ENST00000641598 221 ntBASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 AF228730.8-201ENST00000642140 221 ntBASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA2D4Q7Z3S7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA2D4Q7Z3S7 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA2D4Q7Z3S7 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA2D4Q7Z3S7 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA2D4Q7Z3S7 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA2D4Q7Z3S7 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA2D4Q7Z3S7 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA2D4Q7Z3S7 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA2D4Q7Z3S7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA2D4Q7Z3S7 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA2D4Q7Z3S7 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.09■□□□□ 0.33
CACNA2D4Q7Z3S7 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA2D4Q7Z3S7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA2D4Q7Z3S7 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CACNA2D4Q7Z3S7 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA2D4Q7Z3S7 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA2D4Q7Z3S7 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA2D4Q7Z3S7 FAM58DP-201ENST00000428076 619 ntBASIC17.09■□□□□ 0.33
CACNA2D4Q7Z3S7 AL353705.2-201ENST00000428243 662 ntBASIC17.09■□□□□ 0.33
CACNA2D4Q7Z3S7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.09■□□□□ 0.33
CACNA2D4Q7Z3S7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.09■□□□□ 0.33
CACNA2D4Q7Z3S7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA2D4Q7Z3S7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA2D4Q7Z3S7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.09■□□□□ 0.33
CACNA2D4Q7Z3S7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.09■□□□□ 0.33
CACNA2D4Q7Z3S7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.09■□□□□ 0.33
CACNA2D4Q7Z3S7 AC097359.3-201ENST00000603982 1210 ntBASIC17.09■□□□□ 0.33
CACNA2D4Q7Z3S7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA2D4Q7Z3S7 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.09■□□□□ 0.33
CACNA2D4Q7Z3S7 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
CACNA2D4Q7Z3S7 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CACNA2D4Q7Z3S7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.09■□□□□ 0.33
CACNA2D4Q7Z3S7 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.09■□□□□ 0.33
CACNA2D4Q7Z3S7 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms