Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 AC013726.1-201ENST00000563747 2285 ntBASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 RPL5P21-201ENST00000404620 815 ntBASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 HTR5BP-201ENST00000430851 1154 ntBASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 MTDHP5-201ENST00000598980 586 ntBASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SMARCD3Q6STE5 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.21□□□□□ -0.14
SMARCD3Q6STE5 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SMARCD3Q6STE5 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.21□□□□□ -0.14
SMARCD3Q6STE5 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.21□□□□□ -0.14
SMARCD3Q6STE5 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SMARCD3Q6STE5 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.21□□□□□ -0.14
SMARCD3Q6STE5 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SMARCD3Q6STE5 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 KRT18P58-201ENST00000527480 1120 ntBASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SMARCD3Q6STE5 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms