Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FOXR1Q6PIV2 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.27■□□□□ 0.2
FOXR1Q6PIV2 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
FOXR1Q6PIV2 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FOXR1Q6PIV2 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FOXR1Q6PIV2 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.27■□□□□ 0.2
FOXR1Q6PIV2 HAL-202ENST00000538703 2637 ntTSL 2 BASIC16.27■□□□□ 0.2
FOXR1Q6PIV2 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FOXR1Q6PIV2 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
FOXR1Q6PIV2 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FOXR1Q6PIV2 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FOXR1Q6PIV2 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
FOXR1Q6PIV2 MIR943-201ENST00000401286 94 ntBASIC16.27■□□□□ 0.2
FOXR1Q6PIV2 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.27■□□□□ 0.2
FOXR1Q6PIV2 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.27■□□□□ 0.2
FOXR1Q6PIV2 ADH5P3-201ENST00000433842 1137 ntBASIC16.27■□□□□ 0.2
FOXR1Q6PIV2 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FOXR1Q6PIV2 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.27■□□□□ 0.2
FOXR1Q6PIV2 IGHV3-42-201ENST00000520410 361 ntBASIC16.27■□□□□ 0.2
FOXR1Q6PIV2 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.27■□□□□ 0.2
FOXR1Q6PIV2 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.27■□□□□ 0.2
FOXR1Q6PIV2 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.27■□□□□ 0.2
FOXR1Q6PIV2 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.27■□□□□ 0.2
FOXR1Q6PIV2 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.27■□□□□ 0.2
FOXR1Q6PIV2 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FOXR1Q6PIV2 AL390955.2-201ENST00000603032 514 ntBASIC16.27■□□□□ 0.2
FOXR1Q6PIV2 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.27■□□□□ 0.2
FOXR1Q6PIV2 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
FOXR1Q6PIV2 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
FOXR1Q6PIV2 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC16.27■□□□□ 0.19
FOXR1Q6PIV2 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
FOXR1Q6PIV2 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
FOXR1Q6PIV2 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.27■□□□□ 0.19
FOXR1Q6PIV2 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
FOXR1Q6PIV2 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
FOXR1Q6PIV2 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
FOXR1Q6PIV2 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
FOXR1Q6PIV2 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
FOXR1Q6PIV2 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC16.27■□□□□ 0.19
FOXR1Q6PIV2 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.27■□□□□ 0.19
FOXR1Q6PIV2 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.27■□□□□ 0.19
FOXR1Q6PIV2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
FOXR1Q6PIV2 AC097359.2-201ENST00000604992 2389 ntBASIC16.27■□□□□ 0.19
FOXR1Q6PIV2 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
FOXR1Q6PIV2 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
FOXR1Q6PIV2 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.19
FOXR1Q6PIV2 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
FOXR1Q6PIV2 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
FOXR1Q6PIV2 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
FOXR1Q6PIV2 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 UXT-AS1-201ENST00000590504 1525 ntBASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 LINC01144-201ENST00000626198 1710 ntBASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 AC140658.5-201ENST00000438532 169 ntBASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 IGHV3-62-201ENST00000520057 340 ntBASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 AL645728.2-201ENST00000641974 660 ntBASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 SLC22A20-204ENST00000530038 1673 ntBASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms