Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 RN7SL752P-201ENST00000463779 287 ntBASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 FAM86LP-201ENST00000478302 853 ntBASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 AC239800.4-201ENST00000603712 296 ntBASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 WFDC1-204ENST00000613603 549 ntBASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFWD3Q6PCD5 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 CICP24-201ENST00000605464 2705 ntBASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 AC098614.1-201ENST00000368528 745 ntBASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 INE1-201ENST00000456273 945 ntBASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 AC092552.1-201ENST00000547243 906 ntBASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 AC063926.2-201ENST00000623766 1308 ntBASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.18■□□□□ 0.18
RFWD3Q6PCD5 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms