Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 AC012441.1-201ENST00000446669 685 ntBASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 CROCCP4-201ENST00000457096 498 ntBASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 MIR6775-201ENST00000617557 69 ntBASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 AC104640.1-201ENST00000562617 2109 ntBASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.35□□□□□ -0.11
H3F3CQ6NXT2 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 RPS2P32-201ENST00000439199 892 ntBASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 AC022137.2-201ENST00000503482 481 ntBASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 SNX29P1-201ENST00000548357 1007 ntBASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms