Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.36■□□□□ 0.37
HERC4Q5GLZ8 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HERC4Q5GLZ8 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HERC4Q5GLZ8 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.36■□□□□ 0.37
HERC4Q5GLZ8 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 AC087499.6-201ENST00000411576 835 ntBASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 TIMM17BP1-201ENST00000545713 516 ntBASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 AL109954.1-202ENST00000564051 2148 ntBASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HERC4Q5GLZ8 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 TOMM22P5-201ENST00000416399 439 ntBASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 AC135586.1-201ENST00000539323 574 ntBASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.34■□□□□ 0.37
HERC4Q5GLZ8 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
HERC4Q5GLZ8 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.37
HERC4Q5GLZ8 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HERC4Q5GLZ8 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
HERC4Q5GLZ8 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HERC4Q5GLZ8 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.33■□□□□ 0.37
HERC4Q5GLZ8 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HERC4Q5GLZ8 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HERC4Q5GLZ8 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.33■□□□□ 0.37
HERC4Q5GLZ8 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HERC4Q5GLZ8 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
HERC4Q5GLZ8 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HERC4Q5GLZ8 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms