Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CD47Q08722 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.47□□□□□ -0.09
CD47Q08722 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD47Q08722 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CD47Q08722 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD47Q08722 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.47□□□□□ -0.09
CD47Q08722 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD47Q08722 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
CD47Q08722 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.47□□□□□ -0.09
CD47Q08722 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD47Q08722 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD47Q08722 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD47Q08722 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD47Q08722 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CD47Q08722 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD47Q08722 AL355306.1-201ENST00000415580 579 ntBASIC14.47□□□□□ -0.09
CD47Q08722 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.47□□□□□ -0.09
CD47Q08722 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.47□□□□□ -0.09
CD47Q08722 POLD2P1-201ENST00000511220 997 ntBASIC14.47□□□□□ -0.09
CD47Q08722 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.47□□□□□ -0.09
CD47Q08722 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.47□□□□□ -0.09
CD47Q08722 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.47□□□□□ -0.09
CD47Q08722 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD47Q08722 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.47□□□□□ -0.09
CD47Q08722 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD47Q08722 OR2I1P-209ENST00000641730 5365 ntBASIC14.47□□□□□ -0.09
CD47Q08722 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD47Q08722 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CD47Q08722 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CD47Q08722 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD47Q08722 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD47Q08722 BEND3P1-201ENST00000421591 1944 ntBASIC14.47□□□□□ -0.09
CD47Q08722 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.47□□□□□ -0.09
CD47Q08722 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD47Q08722 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD47Q08722 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.46□□□□□ -0.09
CD47Q08722 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
CD47Q08722 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD47Q08722 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD47Q08722 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CD47Q08722 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD47Q08722 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD47Q08722 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CD47Q08722 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CD47Q08722 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CD47Q08722 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD47Q08722 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD47Q08722 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CD47Q08722 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD47Q08722 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
CD47Q08722 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD47Q08722 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD47Q08722 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.46□□□□□ -0.09
CD47Q08722 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.46□□□□□ -0.09
CD47Q08722 AL671277.1-201ENST00000429656 993 ntBASIC14.46□□□□□ -0.09
CD47Q08722 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.46□□□□□ -0.09
CD47Q08722 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.46□□□□□ -0.09
CD47Q08722 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.46□□□□□ -0.09
CD47Q08722 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD47Q08722 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CD47Q08722 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.46□□□□□ -0.09
CD47Q08722 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CD47Q08722 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CD47Q08722 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
CD47Q08722 AL135744.1-201ENST00000565098 629 ntBASIC14.46□□□□□ -0.09
CD47Q08722 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD47Q08722 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD47Q08722 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD47Q08722 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD47Q08722 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD47Q08722 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD47Q08722 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD47Q08722 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD47Q08722 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CD47Q08722 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CD47Q08722 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CD47Q08722 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CD47Q08722 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CD47Q08722 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CD47Q08722 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CD47Q08722 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
CD47Q08722 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CD47Q08722 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD47Q08722 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD47Q08722 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CD47Q08722 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD47Q08722 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD47Q08722 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD47Q08722 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD47Q08722 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD47Q08722 AKAP8P1-201ENST00000434743 1349 ntBASIC14.45□□□□□ -0.1
CD47Q08722 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD47Q08722 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD47Q08722 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CD47Q08722 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD47Q08722 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD47Q08722 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD47Q08722 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CD47Q08722 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD47Q08722 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms