Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HMGCS1Q01581 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HMGCS1Q01581 AC013726.1-201ENST00000563747 2285 ntBASIC14.98□□□□□ -0.01
HMGCS1Q01581 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
HMGCS1Q01581 LINC01101-201ENST00000622953 1884 ntBASIC14.98□□□□□ -0.01
HMGCS1Q01581 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCS1Q01581 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCS1Q01581 AL139400.1-201ENST00000366220 510 ntBASIC14.98□□□□□ -0.01
HMGCS1Q01581 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HMGCS1Q01581 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCS1Q01581 SERBP1P3-201ENST00000459980 809 ntBASIC14.98□□□□□ -0.01
HMGCS1Q01581 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.98□□□□□ -0.01
HMGCS1Q01581 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.98□□□□□ -0.01
HMGCS1Q01581 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.98□□□□□ -0.01
HMGCS1Q01581 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCS1Q01581 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCS1Q01581 SPDYE12P-201ENST00000618416 771 ntBASIC14.98□□□□□ -0.01
HMGCS1Q01581 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.98□□□□□ -0.01
HMGCS1Q01581 AF228730.6-201ENST00000641497 218 ntBASIC14.98□□□□□ -0.01
HMGCS1Q01581 AC084121.3-201ENST00000641716 218 ntBASIC14.98□□□□□ -0.01
HMGCS1Q01581 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCS1Q01581 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCS1Q01581 Z97205.2-201ENST00000564697 1639 ntBASIC14.98□□□□□ -0.01
HMGCS1Q01581 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCS1Q01581 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCS1Q01581 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCS1Q01581 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.98□□□□□ -0.01
HMGCS1Q01581 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCS1Q01581 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCS1Q01581 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.98□□□□□ -0.01
HMGCS1Q01581 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.98□□□□□ -0.01
HMGCS1Q01581 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCS1Q01581 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HMGCS1Q01581 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCS1Q01581 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.98□□□□□ -0.01
HMGCS1Q01581 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCS1Q01581 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HMGCS1Q01581 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCS1Q01581 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.97□□□□□ -0.01
HMGCS1Q01581 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HMGCS1Q01581 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCS1Q01581 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCS1Q01581 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.97□□□□□ -0.01
HMGCS1Q01581 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCS1Q01581 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCS1Q01581 MYO15B-237ENST00000642007 4893 ntBASIC14.97□□□□□ -0.01
HMGCS1Q01581 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCS1Q01581 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCS1Q01581 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.97□□□□□ -0.01
HMGCS1Q01581 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCS1Q01581 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCS1Q01581 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.97□□□□□ -0.01
HMGCS1Q01581 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.97□□□□□ -0.01
HMGCS1Q01581 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCS1Q01581 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HMGCS1Q01581 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCS1Q01581 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
HMGCS1Q01581 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCS1Q01581 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.97□□□□□ -0.01
HMGCS1Q01581 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HMGCS1Q01581 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCS1Q01581 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCS1Q01581 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HMGCS1Q01581 TSEN15P1-201ENST00000423257 515 ntBASIC14.97□□□□□ -0.01
HMGCS1Q01581 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCS1Q01581 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.97□□□□□ -0.01
HMGCS1Q01581 AC092183.1-201ENST00000469884 875 ntBASIC14.97□□□□□ -0.01
HMGCS1Q01581 HLA-J-203ENST00000494367 1087 ntBASIC14.97□□□□□ -0.01
HMGCS1Q01581 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCS1Q01581 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.97□□□□□ -0.01
HMGCS1Q01581 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
HMGCS1Q01581 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.97□□□□□ -0.01
HMGCS1Q01581 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HMGCS1Q01581 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.97□□□□□ -0.01
HMGCS1Q01581 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.97□□□□□ -0.01
HMGCS1Q01581 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.97□□□□□ -0.01
HMGCS1Q01581 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.97□□□□□ -0.01
HMGCS1Q01581 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.97□□□□□ -0.01
HMGCS1Q01581 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
HMGCS1Q01581 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HMGCS1Q01581 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.97□□□□□ -0.01
HMGCS1Q01581 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.97□□□□□ -0.01
HMGCS1Q01581 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCS1Q01581 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCS1Q01581 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.97□□□□□ -0.01
HMGCS1Q01581 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCS1Q01581 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.97□□□□□ -0.01
HMGCS1Q01581 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.97□□□□□ -0.01
HMGCS1Q01581 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.97□□□□□ -0.01
HMGCS1Q01581 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCS1Q01581 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCS1Q01581 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCS1Q01581 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
HMGCS1Q01581 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCS1Q01581 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCS1Q01581 FGD5P1-202ENST00000614866 2498 ntBASIC14.97□□□□□ -0.01
HMGCS1Q01581 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.97□□□□□ -0.01
HMGCS1Q01581 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCS1Q01581 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
HMGCS1Q01581 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms