Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL1Q00532 AC107890.1-201ENST00000422478 521 ntBASIC15.31■□□□□ 0.04
CDKL1Q00532 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.31■□□□□ 0.04
CDKL1Q00532 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL1Q00532 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL1Q00532 ZNF890P-202ENST00000530367 1156 ntBASIC15.31■□□□□ 0.04
CDKL1Q00532 AL512361.1-201ENST00000554200 418 ntBASIC15.31■□□□□ 0.04
CDKL1Q00532 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.31■□□□□ 0.04
CDKL1Q00532 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.31■□□□□ 0.04
CDKL1Q00532 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.31■□□□□ 0.04
CDKL1Q00532 AL158211.3-201ENST00000607385 239 ntBASIC15.31■□□□□ 0.04
CDKL1Q00532 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.31■□□□□ 0.04
CDKL1Q00532 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.31■□□□□ 0.04
CDKL1Q00532 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL1Q00532 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
CDKL1Q00532 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
CDKL1Q00532 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL1Q00532 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL1Q00532 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.31■□□□□ 0.04
CDKL1Q00532 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.31■□□□□ 0.04
CDKL1Q00532 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL1Q00532 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL1Q00532 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL1Q00532 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL1Q00532 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL1Q00532 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL1Q00532 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL1Q00532 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL1Q00532 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.3■□□□□ 0.04
CDKL1Q00532 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL1Q00532 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL1Q00532 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL1Q00532 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CDKL1Q00532 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL1Q00532 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL1Q00532 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CDKL1Q00532 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.3■□□□□ 0.04
CDKL1Q00532 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CDKL1Q00532 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CDKL1Q00532 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.3■□□□□ 0.04
CDKL1Q00532 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.3■□□□□ 0.04
CDKL1Q00532 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.3■□□□□ 0.04
CDKL1Q00532 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL1Q00532 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.3■□□□□ 0.04
CDKL1Q00532 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL1Q00532 RN7SL618P-201ENST00000477850 296 ntBASIC15.3■□□□□ 0.04
CDKL1Q00532 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CDKL1Q00532 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL1Q00532 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.3■□□□□ 0.04
CDKL1Q00532 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.3■□□□□ 0.04
CDKL1Q00532 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL1Q00532 AC010336.2-201ENST00000564226 506 ntBASIC15.3■□□□□ 0.04
CDKL1Q00532 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.3■□□□□ 0.04
CDKL1Q00532 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL1Q00532 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
CDKL1Q00532 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL1Q00532 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.3■□□□□ 0.04
CDKL1Q00532 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.3■□□□□ 0.04
CDKL1Q00532 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.3■□□□□ 0.04
CDKL1Q00532 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL1Q00532 AC007686.3-201ENST00000619017 3487 ntBASIC15.3■□□□□ 0.04
CDKL1Q00532 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.3■□□□□ 0.04
CDKL1Q00532 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.3■□□□□ 0.04
CDKL1Q00532 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL1Q00532 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL1Q00532 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL1Q00532 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL1Q00532 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.3■□□□□ 0.04
CDKL1Q00532 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL1Q00532 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL1Q00532 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL1Q00532 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.29■□□□□ 0.04
CDKL1Q00532 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL1Q00532 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL1Q00532 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.29■□□□□ 0.04
CDKL1Q00532 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.29■□□□□ 0.04
CDKL1Q00532 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.29■□□□□ 0.04
CDKL1Q00532 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
CDKL1Q00532 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL1Q00532 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDKL1Q00532 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL1Q00532 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL1Q00532 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDKL1Q00532 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CDKL1Q00532 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL1Q00532 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL1Q00532 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CDKL1Q00532 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.29■□□□□ 0.04
CDKL1Q00532 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CDKL1Q00532 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.29■□□□□ 0.04
CDKL1Q00532 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL1Q00532 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CDKL1Q00532 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.29■□□□□ 0.04
CDKL1Q00532 AC087499.5-201ENST00000452760 1342 ntBASIC15.29■□□□□ 0.04
CDKL1Q00532 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL1Q00532 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.29■□□□□ 0.04
CDKL1Q00532 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL1Q00532 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
CDKL1Q00532 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL1Q00532 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms