Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAE1P78406 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAE1P78406 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RAE1P78406 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAE1P78406 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAE1P78406 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAE1P78406 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAE1P78406 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.69□□□□□ -0.06
RAE1P78406 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.69□□□□□ -0.06
RAE1P78406 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.69□□□□□ -0.06
RAE1P78406 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAE1P78406 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
RAE1P78406 AC022144.1-201ENST00000602255 1580 ntBASIC14.68□□□□□ -0.06
RAE1P78406 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAE1P78406 AL390755.1-201ENST00000623716 2027 ntBASIC14.68□□□□□ -0.06
RAE1P78406 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAE1P78406 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.68□□□□□ -0.06
RAE1P78406 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAE1P78406 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAE1P78406 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAE1P78406 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.68□□□□□ -0.06
RAE1P78406 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.68□□□□□ -0.06
RAE1P78406 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAE1P78406 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.68□□□□□ -0.06
RAE1P78406 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAE1P78406 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.68□□□□□ -0.06
RAE1P78406 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.68□□□□□ -0.06
RAE1P78406 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.68□□□□□ -0.06
RAE1P78406 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAE1P78406 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.68□□□□□ -0.06
RAE1P78406 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.68□□□□□ -0.06
RAE1P78406 AC106028.4-201ENST00000614509 607 ntBASIC14.68□□□□□ -0.06
RAE1P78406 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAE1P78406 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAE1P78406 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAE1P78406 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.68□□□□□ -0.06
RAE1P78406 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAE1P78406 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.68□□□□□ -0.06
RAE1P78406 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAE1P78406 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAE1P78406 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAE1P78406 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAE1P78406 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.67□□□□□ -0.06
RAE1P78406 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAE1P78406 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.67□□□□□ -0.06
RAE1P78406 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.67□□□□□ -0.06
RAE1P78406 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.67□□□□□ -0.06
RAE1P78406 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.67□□□□□ -0.06
RAE1P78406 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAE1P78406 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.67□□□□□ -0.06
RAE1P78406 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAE1P78406 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.67□□□□□ -0.06
RAE1P78406 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAE1P78406 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAE1P78406 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAE1P78406 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAE1P78406 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAE1P78406 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAE1P78406 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.67□□□□□ -0.06
RAE1P78406 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RAE1P78406 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.67□□□□□ -0.06
RAE1P78406 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.67□□□□□ -0.06
RAE1P78406 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.67□□□□□ -0.06
RAE1P78406 GAPDHP40-201ENST00000505218 1006 ntBASIC14.67□□□□□ -0.06
RAE1P78406 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAE1P78406 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAE1P78406 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAE1P78406 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.67□□□□□ -0.06
RAE1P78406 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
RAE1P78406 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAE1P78406 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RAE1P78406 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAE1P78406 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.67□□□□□ -0.06
RAE1P78406 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAE1P78406 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.67□□□□□ -0.06
RAE1P78406 FER1L4-210ENST00000615531 5998 ntBASIC14.67□□□□□ -0.06
RAE1P78406 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAE1P78406 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.67□□□□□ -0.06
RAE1P78406 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAE1P78406 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAE1P78406 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAE1P78406 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAE1P78406 LINC00552-201ENST00000625151 2579 ntBASIC14.67□□□□□ -0.06
RAE1P78406 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
RAE1P78406 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.67□□□□□ -0.06
RAE1P78406 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAE1P78406 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RAE1P78406 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAE1P78406 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RAE1P78406 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAE1P78406 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.66□□□□□ -0.06
RAE1P78406 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RAE1P78406 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RAE1P78406 CICP14-201ENST00000629111 2732 ntBASIC14.66□□□□□ -0.06
RAE1P78406 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.66□□□□□ -0.06
RAE1P78406 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAE1P78406 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAE1P78406 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RAE1P78406 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAE1P78406 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms