Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.5□□□□□ -0.25
UBA52P62987 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
UBA52P62987 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.5□□□□□ -0.25
UBA52P62987 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.5□□□□□ -0.25
UBA52P62987 AC026150.2-201ENST00000564693 1156 ntBASIC13.5□□□□□ -0.25
UBA52P62987 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.5□□□□□ -0.25
UBA52P62987 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
UBA52P62987 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UBA52P62987 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBA52P62987 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBA52P62987 AC012645.4-201ENST00000610691 1061 ntBASIC13.5□□□□□ -0.25
UBA52P62987 AL390754.1-201ENST00000619088 582 ntBASIC13.5□□□□□ -0.25
UBA52P62987 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.5□□□□□ -0.25
UBA52P62987 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBA52P62987 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBA52P62987 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.5□□□□□ -0.25
UBA52P62987 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
UBA52P62987 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
UBA52P62987 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBA52P62987 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBA52P62987 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.5□□□□□ -0.25
UBA52P62987 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
UBA52P62987 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBA52P62987 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.5□□□□□ -0.25
UBA52P62987 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBA52P62987 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
UBA52P62987 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBA52P62987 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.5□□□□□ -0.25
UBA52P62987 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
UBA52P62987 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.5□□□□□ -0.25
UBA52P62987 HNRNPRP1-201ENST00000453465 1695 ntBASIC13.5□□□□□ -0.25
UBA52P62987 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UBA52P62987 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBA52P62987 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBA52P62987 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBA52P62987 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UBA52P62987 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.49□□□□□ -0.25
UBA52P62987 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UBA52P62987 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBA52P62987 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.49□□□□□ -0.25
UBA52P62987 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
UBA52P62987 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
UBA52P62987 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBA52P62987 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBA52P62987 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBA52P62987 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
UBA52P62987 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UBA52P62987 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBA52P62987 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.49□□□□□ -0.25
UBA52P62987 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBA52P62987 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UBA52P62987 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBA52P62987 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.49□□□□□ -0.25
UBA52P62987 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UBA52P62987 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
UBA52P62987 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UBA52P62987 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.49□□□□□ -0.25
UBA52P62987 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UBA52P62987 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.49□□□□□ -0.25
UBA52P62987 SPDYE14P-201ENST00000442619 822 ntBASIC13.49□□□□□ -0.25
UBA52P62987 FAM207CP-201ENST00000443486 507 ntBASIC13.49□□□□□ -0.25
UBA52P62987 AL512638.1-201ENST00000457493 794 ntBASIC13.49□□□□□ -0.25
UBA52P62987 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBA52P62987 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.49□□□□□ -0.25
UBA52P62987 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.49□□□□□ -0.25
UBA52P62987 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.49□□□□□ -0.25
UBA52P62987 SLC25A39P2-201ENST00000537614 270 ntBASIC13.49□□□□□ -0.25
UBA52P62987 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.49□□□□□ -0.25
UBA52P62987 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UBA52P62987 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.49□□□□□ -0.25
UBA52P62987 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.49□□□□□ -0.25
UBA52P62987 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
UBA52P62987 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBA52P62987 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
UBA52P62987 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
UBA52P62987 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
UBA52P62987 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBA52P62987 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBA52P62987 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBA52P62987 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBA52P62987 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.49□□□□□ -0.25
UBA52P62987 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBA52P62987 AC008677.1-201ENST00000519230 1561 ntBASIC13.49□□□□□ -0.25
UBA52P62987 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBA52P62987 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UBA52P62987 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
UBA52P62987 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
UBA52P62987 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBA52P62987 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBA52P62987 BEND3P1-201ENST00000421591 1944 ntBASIC13.49□□□□□ -0.25
UBA52P62987 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.49□□□□□ -0.25
UBA52P62987 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBA52P62987 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.48□□□□□ -0.25
UBA52P62987 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UBA52P62987 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UBA52P62987 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
UBA52P62987 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBA52P62987 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.48□□□□□ -0.25
UBA52P62987 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.48□□□□□ -0.25
UBA52P62987 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms