Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS3P61009 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS3P61009 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS3P61009 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.72□□□□□ -0.37
SPCS3P61009 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS3P61009 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS3P61009 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS3P61009 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS3P61009 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.72□□□□□ -0.37
SPCS3P61009 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SPCS3P61009 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS3P61009 AC131902.2-201ENST00000566892 2172 ntBASIC12.72□□□□□ -0.37
SPCS3P61009 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.72□□□□□ -0.37
SPCS3P61009 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS3P61009 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
SPCS3P61009 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS3P61009 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS3P61009 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS3P61009 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC12.72□□□□□ -0.37
SPCS3P61009 AC074386.1-202ENST00000463561 864 ntBASIC12.72□□□□□ -0.37
SPCS3P61009 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC12.72□□□□□ -0.37
SPCS3P61009 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.72□□□□□ -0.37
SPCS3P61009 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC12.72□□□□□ -0.37
SPCS3P61009 MAL2-202ENST00000531508 892 ntTSL 3 BASIC12.72□□□□□ -0.37
SPCS3P61009 RARRES2P8-201ENST00000566335 367 ntBASIC12.72□□□□□ -0.37
SPCS3P61009 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS3P61009 AL138918.1-201ENST00000568306 659 ntBASIC12.72□□□□□ -0.37
SPCS3P61009 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS3P61009 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS3P61009 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS3P61009 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SPCS3P61009 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS3P61009 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS3P61009 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC12.72□□□□□ -0.37
SPCS3P61009 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS3P61009 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS3P61009 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS3P61009 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS3P61009 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.72□□□□□ -0.37
SPCS3P61009 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS3P61009 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.72□□□□□ -0.37
SPCS3P61009 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.72□□□□□ -0.37
SPCS3P61009 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS3P61009 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS3P61009 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SPCS3P61009 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS3P61009 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.71□□□□□ -0.37
SPCS3P61009 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC12.71□□□□□ -0.37
SPCS3P61009 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS3P61009 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SPCS3P61009 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS3P61009 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS3P61009 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.71□□□□□ -0.37
SPCS3P61009 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS3P61009 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS3P61009 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS3P61009 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS3P61009 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS3P61009 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS3P61009 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS3P61009 PHKG1P2-201ENST00000457537 863 ntBASIC12.71□□□□□ -0.37
SPCS3P61009 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS3P61009 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.71□□□□□ -0.37
SPCS3P61009 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC12.71□□□□□ -0.37
SPCS3P61009 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.71□□□□□ -0.37
SPCS3P61009 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC12.71□□□□□ -0.37
SPCS3P61009 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.71□□□□□ -0.37
SPCS3P61009 RN7SL510P-201ENST00000581311 263 ntBASIC12.71□□□□□ -0.37
SPCS3P61009 AC064836.3-201ENST00000607928 673 ntBASIC12.71□□□□□ -0.37
SPCS3P61009 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.71□□□□□ -0.37
SPCS3P61009 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS3P61009 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
SPCS3P61009 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS3P61009 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS3P61009 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS3P61009 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SPCS3P61009 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.38
SPCS3P61009 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.71□□□□□ -0.38
SPCS3P61009 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
SPCS3P61009 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
SPCS3P61009 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SPCS3P61009 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SPCS3P61009 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SPCS3P61009 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SPCS3P61009 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.38
SPCS3P61009 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SPCS3P61009 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
SPCS3P61009 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
SPCS3P61009 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC12.71□□□□□ -0.38
SPCS3P61009 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.71□□□□□ -0.38
SPCS3P61009 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
SPCS3P61009 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.71□□□□□ -0.38
SPCS3P61009 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SPCS3P61009 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS3P61009 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SPCS3P61009 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS3P61009 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS3P61009 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS3P61009 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.7□□□□□ -0.38
SPCS3P61009 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms