Protein–RNA interactions for Protein: P59998

ARPC4, Actin-related protein 2/3 complex subunit 4, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC4P59998 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
ARPC4P59998 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ARPC4P59998 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.71□□□□□ -0.21
ARPC4P59998 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ARPC4P59998 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ARPC4P59998 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.71□□□□□ -0.21
ARPC4P59998 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
ARPC4P59998 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
ARPC4P59998 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ARPC4P59998 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.71□□□□□ -0.21
ARPC4P59998 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.71□□□□□ -0.21
ARPC4P59998 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ARPC4P59998 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.71□□□□□ -0.21
ARPC4P59998 KRT18P21-201ENST00000515767 1272 ntBASIC13.71□□□□□ -0.21
ARPC4P59998 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.71□□□□□ -0.21
ARPC4P59998 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.71□□□□□ -0.21
ARPC4P59998 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.71□□□□□ -0.21
ARPC4P59998 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.71□□□□□ -0.21
ARPC4P59998 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.71□□□□□ -0.21
ARPC4P59998 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
ARPC4P59998 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ARPC4P59998 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ARPC4P59998 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.71□□□□□ -0.21
ARPC4P59998 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
ARPC4P59998 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
ARPC4P59998 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ARPC4P59998 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.71□□□□□ -0.22
ARPC4P59998 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
ARPC4P59998 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
ARPC4P59998 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ARPC4P59998 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.71□□□□□ -0.22
ARPC4P59998 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
ARPC4P59998 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
ARPC4P59998 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
ARPC4P59998 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ARPC4P59998 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ARPC4P59998 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
ARPC4P59998 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
ARPC4P59998 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ARPC4P59998 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
ARPC4P59998 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
ARPC4P59998 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
ARPC4P59998 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARPC4P59998 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARPC4P59998 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARPC4P59998 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.7□□□□□ -0.22
ARPC4P59998 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
ARPC4P59998 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.7□□□□□ -0.22
ARPC4P59998 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARPC4P59998 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
ARPC4P59998 AC012569.1-201ENST00000591191 1524 ntBASIC13.7□□□□□ -0.22
ARPC4P59998 AC091951.1-201ENST00000512854 2465 ntBASIC13.7□□□□□ -0.22
ARPC4P59998 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.7□□□□□ -0.22
ARPC4P59998 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.7□□□□□ -0.22
ARPC4P59998 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ARPC4P59998 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARPC4P59998 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ARPC4P59998 AL928921.2-201ENST00000641325 2442 ntBASIC13.7□□□□□ -0.22
ARPC4P59998 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARPC4P59998 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARPC4P59998 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARPC4P59998 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARPC4P59998 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARPC4P59998 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ARPC4P59998 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARPC4P59998 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARPC4P59998 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.7□□□□□ -0.22
ARPC4P59998 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARPC4P59998 ATP5G2P1-201ENST00000433580 426 ntBASIC13.7□□□□□ -0.22
ARPC4P59998 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.7□□□□□ -0.22
ARPC4P59998 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.7□□□□□ -0.22
ARPC4P59998 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.7□□□□□ -0.22
ARPC4P59998 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.7□□□□□ -0.22
ARPC4P59998 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC13.7□□□□□ -0.22
ARPC4P59998 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARPC4P59998 SART3-203ENST00000546611 1184 ntBASIC13.7□□□□□ -0.22
ARPC4P59998 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.7□□□□□ -0.22
ARPC4P59998 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARPC4P59998 AL355877.3-201ENST00000622820 899 ntBASIC13.7□□□□□ -0.22
ARPC4P59998 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
ARPC4P59998 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.7□□□□□ -0.22
ARPC4P59998 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
ARPC4P59998 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.7□□□□□ -0.22
ARPC4P59998 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
ARPC4P59998 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.7□□□□□ -0.22
ARPC4P59998 C18orf15-201ENST00000623680 2534 ntBASIC13.7□□□□□ -0.22
ARPC4P59998 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARPC4P59998 AC136621.1-201ENST00000624017 2304 ntBASIC13.7□□□□□ -0.22
ARPC4P59998 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARPC4P59998 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARPC4P59998 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.7□□□□□ -0.22
ARPC4P59998 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.7□□□□□ -0.22
ARPC4P59998 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
ARPC4P59998 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.7□□□□□ -0.22
ARPC4P59998 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.7□□□□□ -0.22
ARPC4P59998 TMBIM7P-203ENST00000641617 1718 ntBASIC13.7□□□□□ -0.22
ARPC4P59998 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARPC4P59998 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARPC4P59998 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARPC4P59998 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms