Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH12P55289 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH12P55289 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH12P55289 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH12P55289 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH12P55289 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH12P55289 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH12P55289 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CDH12P55289 AC005237.2-201ENST00000434368 219 ntBASIC14.52□□□□□ -0.09
CDH12P55289 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH12P55289 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.52□□□□□ -0.09
CDH12P55289 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.52□□□□□ -0.09
CDH12P55289 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.52□□□□□ -0.09
CDH12P55289 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CDH12P55289 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.52□□□□□ -0.09
CDH12P55289 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH12P55289 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.52□□□□□ -0.09
CDH12P55289 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH12P55289 AC055717.3-201ENST00000622967 595 ntBASIC14.52□□□□□ -0.09
CDH12P55289 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.52□□□□□ -0.09
CDH12P55289 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH12P55289 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
CDH12P55289 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH12P55289 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH12P55289 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.52□□□□□ -0.09
CDH12P55289 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CDH12P55289 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH12P55289 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH12P55289 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH12P55289 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CDH12P55289 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH12P55289 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH12P55289 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH12P55289 ST20-AS1-201ENST00000560255 4223 ntBASIC14.52□□□□□ -0.09
CDH12P55289 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH12P55289 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.52□□□□□ -0.09
CDH12P55289 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
CDH12P55289 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH12P55289 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH12P55289 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH12P55289 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH12P55289 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
CDH12P55289 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH12P55289 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH12P55289 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH12P55289 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH12P55289 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH12P55289 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CDH12P55289 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH12P55289 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH12P55289 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH12P55289 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH12P55289 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH12P55289 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH12P55289 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH12P55289 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDH12P55289 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CDH12P55289 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.51□□□□□ -0.09
CDH12P55289 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH12P55289 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.51□□□□□ -0.09
CDH12P55289 EEF1DP4-201ENST00000446006 880 ntBASIC14.51□□□□□ -0.09
CDH12P55289 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.51□□□□□ -0.09
CDH12P55289 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH12P55289 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH12P55289 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.51□□□□□ -0.09
CDH12P55289 HNRNPUP1-201ENST00000554987 333 ntBASIC14.51□□□□□ -0.09
CDH12P55289 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH12P55289 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH12P55289 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH12P55289 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.51□□□□□ -0.09
CDH12P55289 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH12P55289 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH12P55289 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CDH12P55289 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDH12P55289 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH12P55289 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH12P55289 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDH12P55289 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH12P55289 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
CDH12P55289 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH12P55289 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CDH12P55289 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH12P55289 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH12P55289 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH12P55289 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH12P55289 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH12P55289 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH12P55289 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDH12P55289 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH12P55289 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH12P55289 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH12P55289 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
CDH12P55289 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.5□□□□□ -0.09
CDH12P55289 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.5□□□□□ -0.09
CDH12P55289 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH12P55289 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH12P55289 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.5□□□□□ -0.09
CDH12P55289 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH12P55289 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CDH12P55289 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms