Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.79■□□□□ 0.12
CDH4P55283 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.79■□□□□ 0.12
CDH4P55283 USP32P1-208ENST00000506594 1164 ntBASIC15.79■□□□□ 0.12
CDH4P55283 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CDH4P55283 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.79■□□□□ 0.12
CDH4P55283 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDH4P55283 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH4P55283 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.79■□□□□ 0.12
CDH4P55283 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH4P55283 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.79■□□□□ 0.12
CDH4P55283 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH4P55283 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDH4P55283 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CDH4P55283 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.79■□□□□ 0.12
CDH4P55283 CICP11-201ENST00000434745 2827 ntBASIC15.79■□□□□ 0.12
CDH4P55283 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CDH4P55283 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CDH4P55283 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.79■□□□□ 0.12
CDH4P55283 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH4P55283 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CDH4P55283 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CDH4P55283 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDH4P55283 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH4P55283 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDH4P55283 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.78■□□□□ 0.12
CDH4P55283 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.78■□□□□ 0.12
CDH4P55283 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.78■□□□□ 0.12
CDH4P55283 KRT8P44-201ENST00000441609 1350 ntBASIC15.78■□□□□ 0.12
CDH4P55283 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.78■□□□□ 0.12
CDH4P55283 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CDH4P55283 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDH4P55283 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH4P55283 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH4P55283 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH4P55283 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDH4P55283 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDH4P55283 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDH4P55283 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CDH4P55283 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH4P55283 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH4P55283 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH4P55283 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
CDH4P55283 AC012441.1-201ENST00000446669 685 ntBASIC15.78■□□□□ 0.12
CDH4P55283 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDH4P55283 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CDH4P55283 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDH4P55283 SLC25A47P1-201ENST00000531577 414 ntBASIC15.78■□□□□ 0.12
CDH4P55283 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.78■□□□□ 0.12
CDH4P55283 AC106886.1-201ENST00000568660 600 ntBASIC15.78■□□□□ 0.12
CDH4P55283 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.78■□□□□ 0.12
CDH4P55283 BTNL10-201ENST00000595971 695 ntBASIC15.78■□□□□ 0.12
CDH4P55283 AC233724.13-201ENST00000598383 410 ntBASIC15.78■□□□□ 0.12
CDH4P55283 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.78■□□□□ 0.12
CDH4P55283 PRSS30P-206ENST00000641773 873 ntBASIC15.78■□□□□ 0.12
CDH4P55283 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH4P55283 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH4P55283 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDH4P55283 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH4P55283 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH4P55283 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH4P55283 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH4P55283 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH4P55283 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH4P55283 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.78■□□□□ 0.12
CDH4P55283 AC126365.1-201ENST00000578585 1514 ntBASIC15.78■□□□□ 0.12
CDH4P55283 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDH4P55283 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CDH4P55283 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH4P55283 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.78■□□□□ 0.12
CDH4P55283 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CDH4P55283 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH4P55283 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH4P55283 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDH4P55283 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
CDH4P55283 AC068587.6-202ENST00000641839 5619 ntBASIC15.77■□□□□ 0.12
CDH4P55283 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH4P55283 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.77■□□□□ 0.12
CDH4P55283 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH4P55283 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH4P55283 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH4P55283 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.77■□□□□ 0.12
CDH4P55283 AC134312.5-201ENST00000568031 1313 ntBASIC15.77■□□□□ 0.12
CDH4P55283 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDH4P55283 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDH4P55283 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDH4P55283 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CDH4P55283 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDH4P55283 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH4P55283 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.77■□□□□ 0.12
CDH4P55283 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDH4P55283 U91328.1-201ENST00000437528 223 ntBASIC15.77■□□□□ 0.12
CDH4P55283 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.77■□□□□ 0.12
CDH4P55283 AC114812.1-204ENST00000449669 728 ntBASIC15.77■□□□□ 0.12
CDH4P55283 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.77■□□□□ 0.12
CDH4P55283 KRT18P25-201ENST00000508931 1278 ntBASIC15.77■□□□□ 0.12
CDH4P55283 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.77■□□□□ 0.12
CDH4P55283 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDH4P55283 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.77■□□□□ 0.12
CDH4P55283 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDH4P55283 AL162274.1-201ENST00000617191 1098 ntBASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms