Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H2P55055 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
NR1H2P55055 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.81□□□□□ -0.04
NR1H2P55055 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.81□□□□□ -0.04
NR1H2P55055 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H2P55055 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.81□□□□□ -0.04
NR1H2P55055 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.81□□□□□ -0.04
NR1H2P55055 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.81□□□□□ -0.04
NR1H2P55055 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.81□□□□□ -0.04
NR1H2P55055 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H2P55055 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H2P55055 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.81□□□□□ -0.04
NR1H2P55055 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.81□□□□□ -0.04
NR1H2P55055 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.81□□□□□ -0.04
NR1H2P55055 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H2P55055 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H2P55055 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H2P55055 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
NR1H2P55055 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H2P55055 CICP8-201ENST00000455800 2813 ntBASIC14.81□□□□□ -0.04
NR1H2P55055 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H2P55055 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H2P55055 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H2P55055 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H2P55055 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H2P55055 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
NR1H2P55055 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H2P55055 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H2P55055 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
NR1H2P55055 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H2P55055 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.8□□□□□ -0.04
NR1H2P55055 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H2P55055 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
NR1H2P55055 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
NR1H2P55055 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
NR1H2P55055 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.8□□□□□ -0.04
NR1H2P55055 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NR1H2P55055 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H2P55055 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H2P55055 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NR1H2P55055 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H2P55055 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H2P55055 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.8□□□□□ -0.04
NR1H2P55055 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H2P55055 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NR1H2P55055 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H2P55055 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.8□□□□□ -0.04
NR1H2P55055 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.8□□□□□ -0.04
NR1H2P55055 AC087163.2-201ENST00000457299 853 ntBASIC14.8□□□□□ -0.04
NR1H2P55055 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
NR1H2P55055 AC112191.1-201ENST00000523689 701 ntBASIC14.8□□□□□ -0.04
NR1H2P55055 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NR1H2P55055 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.8□□□□□ -0.04
NR1H2P55055 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
NR1H2P55055 AC091812.2-201ENST00000619081 385 ntBASIC14.8□□□□□ -0.04
NR1H2P55055 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.8□□□□□ -0.04
NR1H2P55055 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H2P55055 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.8□□□□□ -0.04
NR1H2P55055 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H2P55055 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H2P55055 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.8□□□□□ -0.04
NR1H2P55055 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H2P55055 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
NR1H2P55055 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H2P55055 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H2P55055 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.8□□□□□ -0.04
NR1H2P55055 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H2P55055 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NR1H2P55055 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H2P55055 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H2P55055 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
NR1H2P55055 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
NR1H2P55055 AL359881.3-201ENST00000602640 1721 ntBASIC14.8□□□□□ -0.04
NR1H2P55055 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H2P55055 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
NR1H2P55055 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
NR1H2P55055 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.8□□□□□ -0.04
NR1H2P55055 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H2P55055 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H2P55055 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
NR1H2P55055 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H2P55055 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NR1H2P55055 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H2P55055 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.79□□□□□ -0.04
NR1H2P55055 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H2P55055 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
NR1H2P55055 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H2P55055 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NR1H2P55055 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H2P55055 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NR1H2P55055 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H2P55055 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.79□□□□□ -0.04
NR1H2P55055 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H2P55055 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H2P55055 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H2P55055 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H2P55055 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H2P55055 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
NR1H2P55055 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
NR1H2P55055 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms